Plectropomus leopardus (leopard coralgrouper): 121951990
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Entry
121951990 CDS
T07454
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121951990 (copa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121951990 (copa)
Membrane trafficking [BR:
plep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121951990 (copa)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121951990 (copa)
Exosomal proteins of bladder cancer cells
121951990 (copa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
121951990
NCBI-ProteinID:
XP_042354426
LinkDB
All DBs
Position
12:22405862..22418904
Genome browser
AA seq
1221 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETE
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPSPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADLDMDAP
GGEGWGDDAELQLDEDGFMDAQEGFGEEGGVKEEGGGWEVEEDLDLPPELDVPAAGGGAE
DGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVSFEPYKALFMQTL
SRGRTCYLGLPSLPCLRGHPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRFE
EAVERFRIILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQQKR
LCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPDVAQQTRK
ILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICRV
TQVTEIGKDVIGLRVSPLQFR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaatttgaaacgaagtcggcccgtgtcaaaggcctgagtttccatcctaag
aggccatgggttcttgcaagtttgcacaacggagtcatccagctgtgggactatcggatg
tgcacactgattgataaatttgacgagcatgatggccctgtcagagggattgatttccac
aagcagcagcctctgtttgtgtctggaggagatgactacaaaattaaggtgtggaactac
aagctgagacgctgccttttcacactccttggacacctcgattacatcagaaccaccttc
tttcatcatgagtatccctggattctgagtgcctcagatgaccaaaccatacgcatctgg
aactggcagtccaggacttgtgtctgtgtgctgacaggccataatcactatgtgatgtgc
gcccagttccacccagctgaggacctggtggtgtcggccagtctggaccagaccgtgcga
gtgtgggatatttccggtctgaggaagaagaacctgtctccaggcgccgtggagacggaa
gtgcgaggcatctctggcgttgacttgttcggtgcctcggatgctgttgtcaagcacgtc
cttgagggtcatgaccgtggggtcaactgggctgccttccatcccaccatgcctctcatt
gtgtctggagctgacgacaggcaggtcaagatttggagaatgaatgaatcaaaggcctgg
gaactggacacatgccgcggtcactacaacaacgtgtcatgtgctgtcttccacccgcgc
caggagctcatcctgtccaactctgaggacaagagcatccgggtgtgggatatgtccaaa
aggactggtgtgcagacctttcgccgtgaccacgatcgcttctgggtgctaggggctcac
ccaaacctcaacctgtttgctgctggtcatgacagcggcatgattgtgttcaagctagag
cgtgagcgcccggcatacgccgtgcatggcaacatgctgtactatgtcaaggaccgtttc
ctccgccagctcgacttcaacagcagcaaggacaccgctgtcatgcagcttcgcagtgga
tccaagttcccagtattcagcatgtcgtacaaccctgctgagaacgctgtactgctctgc
actagggcgaccaacctggagaacagtacctatgacctgtactctattcccaaagaaagt
gactctcagaaccctgatgcaccggaagggaagaggtcctctggtctgactgcagtctgg
gtggccagaaacagatttgccgtcctggatcgtatgcactctctgctgattaagaacctg
aagaatgaaatcgtgaaaaaagttcaggtgccgagctgcgaggaaatcttctacgctggc
acaggctcgctgctgctgcgcgatgccgatggcgtcacgcttttcgacgtgcagcaaaaa
cgctctctggctactgtcaagattgccaaggtcaagtacgtggtgtggagtgctgacacc
agccacgtggccctgctggctaaacacgccatcatgatctgcaaccgtaagctggagagt
ctgtgcaacattcatgagaacatcagggtgaagagcggagcctgggacgagagtggagtc
ttcatctacaccacctccaaccacatcaaatacgccctcacctctggagatcacggcatc
atcaggaccctggacctgcccatctatgtgacgcgtgtgagaggaaacagtgtttactgc
ctggacagggagtgcaggccgcgcgtcctcaccatcgaccccacagagtaccgcttcaaa
ctggccctggtcaaccgcaaatatgatgaggtgctccacatggtgcgtaatgccaagctt
gtgggccagtccatcattgcctacctgcaaaagaagggctaccccgaggtcgcgcttcac
tttgtcaaagacgagaagacacgcttcagtctggctctggagtgtggaaacatcgaggtg
gctctggaggcagccaaagccctggatgagcgcagctgctgggagcgtctgggtgaagca
gcactgctgcagggacaccaccaggtcgtggagatgtgctaccagaggaccaagaacttt
gacaaactcaccttcctctacctcatcactggcaacctggccaagctgcgcaagatgatg
aagatagctgagatcaggaaggacatgagtggtcactaccaggcagctctctacctggga
gacgtcagtgagagggtccgcatcctgaagaactgtggacagaagtctctggcttacctg
actgcagccactcatgggctggatgaagaggctgaggcgctcaaggagacctttgaccca
gaaaaggagacggtgccagaggttgatcccaatgcacagctgctgcagccctctccaccc
atcaaccctctggacactaactggcctctgctgactgtgtcaaagggcttctttgaggga
gccattgcagcaaaggggaaggcaggtcagatggctgccgacctggacatggacgcccca
ggaggcgagggctggggagacgatgctgagcttcagctggatgaagatggcttcatggat
gcccaggaaggatttggggaagaaggtggagtgaaagaggagggaggaggctgggaggtg
gaggaagacctggaccttcctccagagctggacgtgccggctgcaggtggaggagcagaa
gacggcttctttgtccctccgaccaagggcatgagtcccacacagatgtggtgcaacaac
tcgcagctgccagtggaccacatcttggctggctctttcgaaactgctatgagattgctc
cacgaccaggtaggagttgtaagcttcgagccctacaaggcgctgttcatgcagacgctc
tccagaggccgcacctgttacctggggctgccctccctgccctgcctgcgtggccatccc
cagagaaactggaaggattgtggtgcaaagcaaggactgcctgctgtgggcctgcgcctc
tccgacctcattgcccgcctgcagcagtgctatcagctgactacctccgggcggtttgag
gaagctgtcgagcgcttcagaatcatcctgctgtctgtacccctgctggtggtcgataac
aagcaggagattgcagaggctcagcagctgatcacaatttgcagagagtacatagtgggt
ctgaccatggagacagagaggaagaagttgcctaaagacacgttggaccagcagaagagg
ctgtgtgagatggctgcttacttcacccactgtaatctccagccagtccacatggtgctg
gtgttgcgcacagctctgaacctcttcttcaaactgcgcaacttcaagacagccgccggc
ttcgcacgacgcctgctcgagctggggccaaagccagatgttgcacagcagacccgcaag
attttggcagcctgtgagaagaccctcacagatgcccaccagttgaactacgacccccat
aatccatttgacttgtgcgctgcctcctttgtcccactgtaccgtggacgtcctgttgag
aagtgcccactgtctggagcctgctattgccccacttacaaaggccagatctgcagggtc
acacaggtgacagagatcggtaaggatgtgatcggtctgcgtgtcagtccacttcagttc
cgttaa
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