Plectropomus leopardus (leopard coralgrouper): 121952178
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Entry
121952178 CDS
T07454
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121952178 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121952178 (uimc1)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
121952178 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
121952178
NCBI-ProteinID:
XP_042354632
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All DBs
Position
13:10225983..10255327
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AA seq
1040 aa
AA seq
DB search
MRGRGGHSSSSGKTVSQQQTRMALRKQILKDASDIPTGSQPADENTQEDETLNDQDNTVK
NDELSLSLLSSSREKRKKERENKSKPKEMTEEEMMALALRLSEQEASVTALRLQEEEEAV
MKAIQESMVSQTQPCSQSLLADAEASLRICSRRKLLYSNRKKASANEQGASEDTCTPETD
VNRGAKGSGDESNNRSKKRKRKEGSPLLEMPDLSQTQKIYSQASPCSSECPSVPLDSPQS
CDSTQIDDCQLRKSPVFSSTGSRAEVHIPRLNQDLLESCRTSGFVLCSQDSLTSTQKSQP
AEPKSPTFPKSPKCSGNHTLSKSPNFLETDQEDDRETEQSPEYFKSPVFGRITQHERSPS
ACKPPDRVCNSEFMFSSQGSLTPSVRSTSCQPKSPVFPRSPGVSKNVAPSETLVSSNSPV
FSETDGEQTEQSLGCCISPVFGGTPQQQQKIHLDEQKDSVSPSAAGLRGSATEKNSTTSS
GPSQSLRQDSKINNQEVGFNNSSQSDDAEEPNRTSKDWNSADMELTSDMTLHWSDEDDDV
TPVGSPSPVFPEERRVHQADSQAASLNHTTEASPGTNCRPSSSSTSAAPVEPGGRPMVHY
YWGVPFCPRGLDPDKYTQVILAQMEVYEKSLKQAQRCLLRKAEWGDAIQPQPEKSPSPES
PESPQLLVPQRRGLRLRGRKLCESADSPSAEAEEEEDKKEEEEERQSKEEEKKEEEDGEV
QVDTDDCEVCPETQLTDNDDDRTQDLMMDTDAGTKSDVKKSREQPEVEMILRDDSPAGDE
LQEEEMEVEVDALEDRKTKGDVPVSNSSSDIGKQHVRNETVEDKDPDVEEIKDRGLQRSM
SPELEPATVPESPETKVDCPICQGSFPVTEIEMHAAYCDGEVAVVDERRPENNSSLKPRR
KRTRRTETTDEETDPSNAGKNREKCYICQKAVPLRDYNRHTEICIQRQASKTKGNLLSAL
EQTESRDSDAGPSGSKVQPGDVIDLRDDDEDEDVAEEGSISMLRISNSPIRSFTPISEAT
GCLIDFKKQQRVKKPRQRRR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaggaggacactcttcgtcatcaggtaaaacagtttctcagcagcagacc
aggatggctctgaggaagcaaatactcaaggatgccagtgacattcccactggaagccaa
ccagccgacgaaaacacgcaggaagatgaaactctcaacgaccaagacaacactgtaaaa
aatgacgagctctcattgtcacttctatcgtcatcaagagaaaaacgcaagaaggagagg
gaaaacaaatccaaacccaaagagatgacagaggaagagatgatggccttggctctgcgt
ttgagcgaacaggaagccagcgttactgcacttagactgcaggaagaggaggaggccgtg
atgaaagccatccaggagagtatggtcagccagacacaaccgtgctcacagagcctgctc
gccgatgccgaagcttcactcaggatctgctctcgacgaaaactcttgtactcaaacaga
aagaaggcatctgctaacgaacagggagcatcagaagacacctgcacgccagagacagat
gtgaaccgaggagcaaaaggaagtggcgatgaaagcaataacaggagtaaaaagcggaaa
aggaaagaaggaagtcctctgctggagatgccggacttatcacagactcagaaaatctac
tctcaggcttcaccctgcagctccgaatgtccctcagtgcctctggactcaccgcagagc
tgtgactcgacccagatcgatgactgtcagctccgtaaatcccctgtcttctcctccact
ggctccagagccgaggttcacatcccccggctgaaccaggacctgctggaaagttgcaga
acatctgggtttgtgttgtgctctcaggacagtttgacctcaactcaaaagtctcaacct
gctgaacccaagagcccgacgtttcccaaaagtcccaaatgctccggtaatcacactttg
tcgaagagtcccaacttcttagagactgatcaggaagacgatagagagacggagcagagt
cctgagtattttaaaagtccagtatttggcaggattactcagcatgagaggtctccaagt
gcctgcaaacccccagaccgtgtctgtaactcagagttcatgttctcttctcaggggagt
ttaaccccctctgtgaggtccacatcctgtcagcctaagagtccagtgttcccaagaagc
ccaggtgtttccaaaaacgtcgctccctctgaaacattagtatcgagcaatagtcctgtt
ttctcagagactgacggagagcagaccgagcagagtcttggatgttgtataagcccagtg
tttggcgggactccacaacaacaacaaaagattcatcttgatgagcagaaagactctgtg
agtccttcagctgcaggtctcagaggttcagccactgaaaagaattcaaccacatccagt
ggtccctctcagagtctgaggcaggacagcaagataaacaatcaagaagttgggtttaac
aactcatctcagtcagatgatgcagaggagccaaatcgaacgtccaaagactggaactct
gctgacatggagctgaccagtgatatgacgctacactggtctgacgaggacgacgatgtc
acgccggtgggctcacccagccccgtcttcccagaggagagacgtgttcatcaggcagac
agccaggctgcttccctgaaccatacgactgaagcttctccagggacgaactgcagacct
tcttcctcttctacatctgccgcgcctgtggagcctgggggcaggccgatggtgcactac
tactggggagttcccttctgtccacgaggcctggacccagacaaatacacacaggtgatc
ctggctcagatggaggtgtatgagaagagtctgaagcaggctcagaggtgtctgctgagg
aaggctgagtggggggatgccatccagccacagccagagaaatccccttcacctgaatcg
cctgaatcacctcaactgcttgttcctcaaaggcgaggcctcagactgagaggcagaaaa
ctgtgtgaatcagctgatagcccatcagctgaggcagaggaggaggaggacaagaaggag
gaagaggaggaaagacagagcaaagaggaagagaagaaggaggaggaggatggagaggta
caggtggacacagatgactgtgaggtttgtccagaaacccaactgactgacaacgatgac
gacaggacgcaagatctgatgatggacactgacgctggaacaaagtctgatgttaaaaag
agtcgagagcagccggaggtcgagatgattctccgcgatgactctccagctggggatgag
ctgcaggaggaggagatggaggtggaggtggacgccctagaggacagaaagacgaaagga
gacgtccctgttagcaacagcagcagcgatattggaaaacaacatgtaagaaatgaaacg
gtagaggataaggatccagatgtggaggagataaaggatcgaggccttcaaaggtcgatg
tctcctgagctggaaccagccaccgtccctgagagccctgaaaccaaagtggactgtccc
atctgtcaggggtctttcccagtcacggagattgagatgcacgctgcgtactgcgatggt
gaggtggctgttgtcgatgagaggaggcctgaaaacaactcgtcactgaagccacgtagg
aagagaacacgaagaacagagacgactgatgaagagacagacccctccaacgctggcaag
aaccgagagaaatgttacatctgtcagaaagctgttcctctgagagactacaaccgccac
acagagatatgcatccaacggcaggcatcaaagactaagggaaatctgctgtcggctctg
gagcaaacagagagcagagattcagatgcggggccatctggatccaaagtccaaccagga
gatgtcatagatctgcgagatgatgacgaagatgaggatgtggcagaggagggcagcatt
tcaatgctcagaatcagtaactctcccatcaggtccttcactccgatctcggaggccacc
ggctgccttatcgacttcaaaaaacagcagagagtcaagaagccgcgccaaagacgaaga
tga
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