Plectropomus leopardus (leopard coralgrouper): 121952457
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Entry
121952457 CDS
T07454
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04142
Lysosome
plep04144
Endocytosis
plep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121952457 (cltca)
04142 Lysosome
121952457 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121952457 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121952457 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121952457 (cltca)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121952457 (cltca)
Exosome [BR:
plep04147
]
Exosomal proteins
Proteins found in most exosomes
121952457 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
121952457
NCBI-ProteinID:
XP_042355097
LinkDB
All DBs
Position
13:complement(5446566..5494709)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNTLFAAGNYSEAAKVSANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
EEKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGNPQLMLTAGPSVPVAPQQPYGYGYQAPAGYSQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccggccaacataggcttcagcaccctaaccatggagtcggataagttcatctgtatc
cgggaaaaggttggcgagcagactcaggttgtgatcattgacatggcagaccccaataca
cctatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgagatgaagagcaagatg
aaggcgcacaccatgacggacgatgttaccttctggaagtggatctctctcaacacagtt
gcacttgtgactgacactgccgtctaccactggagcatggagggtgactcacagcctgtg
aaagtcttcgaccgccactccagcctggcaggctgccagatcatcaactatcgcactgac
gccaagcagaaatggctcctgctcattggcatctcagcccagcaaaaccgggtggttgga
gccatgcagctctactctgttgacagaaaggtgtctcagcccattgaaggccacgctgcc
agctttgcccagttcaagatggagggtaattcagaggagtccactttgttctgcttcgcg
gtcagagggcaggctggaggaaagttgcatatcattgaagttgggacgccaccaactggc
aaccagccgtttccaaagaaagcagtggatgtgttcttccctccagaggcccagaatgac
ttccctgtggccatgcagataagctccaagcaagatgtggttttcctcatcaccaaatat
ggctacattcacttgtatgacttggagaccggcacctgcatctacatgaaccgcatcagc
ggagagaccatctttgtaaccgctccacatgaggccaccgctggcatcatcggggtcaac
aggaaggggcaggtgctgtcagtctgtgtggaagaggagaacatcatcccctacatcact
aacgtgctccagaatccggatctggctctccgcttagctgtccgcaacaacctcgctggt
ggtgaagagctctttgcacgcaagttcaacaccctgtttgctgctggaaactactccgag
gctgccaaggtttctgccaatgcaccaaagggtatcctgcgaacaccagacaccatccgt
cgcttccagagcgttcccactcagcccggccagacctcccccctgctgcagtacttcggt
atcctgttggaccagggccagctcaacaagtttgagtccctcgagctctgcaggcctgtc
ctccagcagggacggaagcagctcctggagaagtggctgaaggaagacaagttggagtgt
tcggaggaactgggtgatctggtgaaggcagtggatcccaccttggctctcagtgtctac
ctgagggccaacgtccccaacaaagtcatccagtgctttgcagagactggtcagttcccc
aagatcgtcctgtacgccaagaaggttggctacactccagactggatcttcctgctcagg
aatgtgatgcggatcaacccagaacaaggcttgcagtttgcccagatgctggtccaggat
gaagagccactggctgacatcacacagatcgtggatgtattcatggagtacaacctgatc
cagcaatgcacgtcattcctcctggacgctctcaagaacaacagaccctcagagggacca
ctgcagacccgccttctggagatgaaccttatgcatgctccacaggttgctgatgctatc
ctgggcaaccaaatgttcaccaactacgatcgtgcccacatcgcccagctgtgcgagaag
gctggactcctgcaaagggcgctggagcactacaccgacctgtatgacatcaagcgcgct
gtggtgcacacacacctgctcaacccagagtggctggtgaacttctttggctcgctgtcg
gtggaggactctctggagtgtctcagggccatgctgtcggctaacattcgccagaacctg
cagatctgtgtccaggtggcttccaagtaccatgaacagctcaccacacagtctctcact
gagctctttgagtccttcaagagcttcgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccctgaggttcacttcaaatacatccaggccgcctgtaagacgggt
cagatcaaagaggtggagaggatctgcagagagagcaactgctacgaccccgagcgcgtc
aagaacttcctcaaggaagccaaactcactgaccagctgccactcatcatcgtctgtgac
cgctttgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaagtac
atcgagatctatgtgcagaaggtgaatccaagccgtctgcctgtcgtggtcggtggtctc
ttagacgtggactgctcagaggatgtcatcaagagcctgatcctggtcgtcaggggacag
ttctccactgatgaactggtcgctgaggtggaaaagaggaacagactgaagctgctgctg
ccctggctggagtctcgtatccacgaaggctgtgaggagcccgccacccacaatgctttg
gcaaagatctacattgacagcaacaacaaccctgaacgcttcctgagggagaacccgtat
tacgacagccgcgtggtgggaaagtactgcgagaagagagacccccacctcgcctgtgtg
gcctacgagagaggacagtgtgaccaggagctcatcaatgtgtgcaatgagaactccctg
ttcaagagcttgtctcgctacctggtgcgccgtaaagaccctgacctgtgggccagcgtg
ctgctggagagcaaccccttcagacgaccactcatcgaccaggtggtgcagacagcgctg
tcagaaacccaggaccccgaggaggtatcggtcacagtcaaggccttcatgactgcagat
ttgcccaacgagctcattgagctgcttgagaagattgtgttggacaactctgtcttcagt
gaacacagaaacctgcagaacctgctgatcttaactgcaatcaaagctgaccgtacccgt
gtgatggagtacatcagcaggctagacaactacgacgctcccgacatcgctaacattgcc
atcagcaacgagctctttgaggaagcctttgccattttcaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgaacatattggcaacttggaccgtgcctatgagtttgca
gaacgctgcaacgagccggctgtgtggagccagctggcgaaggctcagctacagaaggac
ttggttaaagaagccatcgactcctacatcaaggccgatgatccctccgcgtacatggag
gtggtgcaggctgccgataagagtggtaactgggaggacttggtcaaattccttcagatg
gctcgtaagaaggcccgcgagtcctacgtggagacggagctcatctttgctttggccaaa
accaaccgcctggctgagctggaagagttcatcaatggccccaacaacgctcacatccag
caggtcggtgaccgctgctacgacgagaaaatgtatgacgccgccaagctgctctacaac
aacgtctccaactttggtcgtctggcttcaactctggtgcacctcggggagtaccaggcc
gctgtggacggcgcccgtaaggccaacagcacccgcacctggaaggaggtgtgctttgcc
tgcgtggacggaaaggagttcagacttgcccagatgtgcggtctccacatcgtggtgcac
gccgacgagctggaggagctcatcaactactaccaagaccgcggttacttcgaggagctg
atcaccatgctggaggccgccctgggcctggagcgcgctcacatggggatgttcacggag
ttggccatcctttactccaagttcaagccccagaagatgagggagcatctggagctcttc
tggtccagagtgaacatccccaaggtcctgagagcagcggagcaggctcacctgtgggcc
gagctcgtcttcctgtacgacaaatacgaggagttcgacaacgccatcatcaccatgatg
aaccacccgacagacgcctggaaggagggacagttcaaagacataatcaccaaggtggcc
aacgtggagctgtactacaaagccacgcagttctacctggagttcaagcccttgttactg
aatgatttgctcatagtgctttcccccagactggaccactctcgcgctgtcaacttcttc
accaaggtgaaacagctgcccctggtcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaacgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgaggacatcaatagatgcctacgacaacttcgacaacatctcactggcccagcgcctg
gagaagcacgagctgatcgagttcaggagaatcgctgcctatctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaagacaagctctacaaggatgccatgcag
tacgcgtcagagtccaaggacatcgagctggcagaggagctgctgtcctggttcctacag
gaggagaagaaggagtgtttcgccgcctgcctgttcacgtgctacgacctgctgcggccc
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctcagagtcccta
cggaaagaggaggagcaggcaacggagacgcaacccatcgtctacggcaatccccagctg
atgctgacagcgggccccagcgtacctgtggccccgcagcagccttacggctacgggtac
caggcgcctgcaggatacagtcagccagcagctcagcccggcttcggctacggcatgtaa
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integrated database retrieval system
