Plectropomus leopardus (leopard coralgrouper): 121952641
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Entry
121952641 CDS
T07454
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121952641
03041 Spliceosome [BR:
plep03041
]
121952641
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121952641
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
121952641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121952641
NCBI-ProteinID:
XP_042355372
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All DBs
Position
13:19868080..19881136
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AA seq
1108 aa
AA seq
DB search
MDAVNAFNHELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGSDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSAAAPYTGSDDPGSSPPPAKEPVTAVTANSTMTPAAQLQNS
DAFAAVAQLFQSTQGQQLQQMLQNFQQQPVKPDTNTPPPVPTVQTQAPNVTTGQGMVTPQ
PPLPTQAAQQKTAFDKKLLDRFDYDDEPEVGEETKKDEMSSQASFMQQPPAFPQHMEHFK
PSMLNMFQDLSQQAPLPPNGQPQAYGLPPGQSFPVMMPHMGHALPGQTLPGSTGPPSFPG
VFPPQNTAQQQQDLSVDVDRSSMRDGRHGRRSNSGSRSPKRRRSRSNSRTRRSRHRRSRS
RSRDRRHHSPRSRSQERREREKERERRQKGLPPPKSETLSICSTTLWVGQLDKRTQQQDV
ACLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGSHKVNQKTIKIAWALNKG
IKSEFKQYWDVEMGVTFIPWSKIRETQLEELKEGGILDPDTLSPEWSGARKTLGLLEELT
HNGRSEPQQPEEPQVIPVAAAAAPPAQVPPMQQPMVGVGSLQPPVFPGPIGLPPPSFPPG
VPPPPFIRPGFNPMQLPPGFPPPGAMPLGPPPPSKGGVEDPPLDPVGLGNRKHDEVPEGP
NIFNNQIGPLGNPVGGPPGSLPSGPPGNIPPPSAGLLGARPGIIPLQRPPGPPPPHIRFP
PPHGPRPPHSSLPPMPPQMIPRGPHPQIMHHDTPPPKGGFGMLPPHNIRAPFPPHGPPPQ
GPPPPFIRPGGPRALDGPEEMDSRPFRGDRPGFRDREPERDRDWDRDRDRDRERDRGFGG
GRRPFGDGGRGGSGDRMDGRDRLGGWQEEGGDHRGGGWERDRDRDRDRDRDRDRRDWRER
RNSLDSDRERGRGDDGERDRGRGEGGGRGRVEGGSQNRGRGAEGKEGDKPRRERRERTTR
WDRDDRLAELEKMDIFRTSNTTEQPRVTPAVTTETSKEPSAEASEKKAESELLSPSPGVT
AAAGEPKPSEPSPSAQSEPTEAKQEAAS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgcctttaaccacgagttattctcgttgatggactccaagccccca
atctcaagggctaagatgatctccatcaccaagtcagccatcaaagctatgaaactctac
aaacacgtggtccagattgtggaaaaatttatcaaaaagtgtaagcctgagtacaaggta
gcgggcttgtatgtggtggattccattgttaggcagtctagacaccagttcggatcagac
aaggacgtgtttggcccaaggttcaccaaaaacattacaggaacctttgagaacctttgc
ctttgcccagtagaggacaggagtaagatcgtgcgggtgttgaacctgtggcagaagaat
ggggtgttcaagattgaggttattcagccgctcctggacatggcagctggctcgagcagt
gctgctgcaccctacacaggatcagatgacccaggttcttccccacctccagccaaagag
ccggttactgcagtaacggcaaactccaccatgacaccggctgctcagctgcaaaactct
gatgcctttgctgctgtggcgcagctcttccagtccacgcagggtcagcagcttcagcag
atgctccagaactttcagcagcagccagtgaagcctgacaccaacactccgcctcctgtc
cctaccgttcaaacacaggccccgaatgtcaccactggccagggcatggtcaccccgcag
ccacctctgcccacccaagctgctcagcagaagacagcatttgacaagaagttgctggac
cggttcgactatgatgatgaaccagaggttggagaagaaacaaaaaaggatgaaatgtca
tcacaagcctcttttatgcagcagcctccagccttcccacagcacatggagcactttaaa
ccatcgatgcttaacatgtttcaagacctctcacaacaggctcctctgcctccgaatgga
cagcctcaggcttatggtttacctccaggacaaagcttcccagttatgatgcctcatatg
gggcatgctttgccaggccagacgctccctggttctactggcccaccaagcttcccagga
gtatttcctccccaaaataccgcccagcaacaacaggatttgtctgtggatgtggaccga
tcgtctatgagagatggcagacacggtcgacggtcgaactcaggctccaggtctccaaag
cggaggaggtcacggtctaattcccgtacacgacgatccaggcacaggcggtcgcgctct
cgctccagagaccgtcgtcaccattccccacgctcgcgctcgcaggagcgcagggagaga
gagaaggagagagagcgacggcagaaaggcctcccaccacccaagagcgagacactaagc
atttgcagtacaactctgtgggtgggccagctggacaagagaacacaacagcaagatgtt
gcctgtttactggaggagtttgggcagatagagtccatcaatatgattcctccgcggggc
tgtgcctatatcgtcatgatacataggcaagatgctttcagggctctgcagaagcttagt
agaggatctcacaaagtgaaccagaaaactatcaagattgcttgggctttgaacaaaggc
ataaagtctgagtttaaacagtactgggatgtggagatgggtgtcacctttataccatgg
tctaaaatcagagagacccagttggaggagctaaaagaaggaggaatattggatccagac
accttatcaccagagtggagtggagcgaggaagactcttggcctcctggaggaactcacc
cacaacggccgttctgagccccagcagcctgaggaaccacaagtaatacctgtggctgcc
gcagctgctcctcctgcacaggttcctccaatgcagcagccaatggttggtgtgggttct
ctccagcctcctgtttttcctggtcccataggcctgcctccaccttccttccctccaggc
gtcccccctcctccttttatcagacctggcttcaaccctatgcagcttcctccaggtttt
cctcccccaggtgcgatgcccctgggtcccccacctccctccaaaggtggagttgaagac
ccgcctctggatccagtgggtcttggcaacaggaaacatgacgaggtcccggaaggtccc
aacattttcaacaaccagataggacctttgggtaacccagtaggtggacctccaggttct
ctcccaagtggtcctccaggaaacatcccacccccgtctgctggtttgcttggcgcgcgg
cccggtataatcccgctccagcgtcctccgggtcccccaccaccacacatacgtttccct
ccaccccacgggccaagacctcctcactccagcttgcctcctatgcccccacagatgata
cccagagggccacaccctcaaataatgcatcatgacactcctccacctaaagggggcttt
gggatgctccctccccacaatataagggctcctttccctccacatggcccacctcctcaa
ggtcctcctcctccttttatcagaccagggggaccacgcgccctggatgggccagaagaa
atggacagcagaccattcaggggagacaggcctgggtttagggaccgagagccagagagg
gacagggactgggatcgagacagggacagggacagagagagggacagaggctttggaggt
ggaaggcgtccatttggtgatggagggaggggaggaagtggtgatagaatggatggaagg
gaccggctcggaggctggcaggaagaaggaggagatcaccggggaggaggatgggagaga
gacagagatcgggatagagaccgcgatcgagacagagacagacgggactggagggagagg
cgaaacagcctggatagcgacagggagcgagggaggggagatgatggggagagggatcga
gggaggggagagggaggagggagagggagggtagaaggtgggagtcaaaacagaggcaga
ggagctgaaggaaaagaaggggacaagccaaggagagaacgccgagagaggaccacgcgg
tgggacagggacgatcgattggccgaactggaaaaaatggacatatttcggacctctaac
accacagagcaaccccgggtgacccctgcggttaccacggaaaccagtaaagaaccaagt
gcggaagcttctgaaaagaaggcagaatctgaacttttatctccgtccccaggggtaact
gctgctgcaggagagccgaagccctccgagccctcaccttcagctcaaagtgagcccaca
gaagcaaaacaggaagcagcatcatag
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