Plectropomus leopardus (leopard coralgrouper): 121952848
Help
Entry
121952848 CDS
T07454
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121952848 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
121952848 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121952848 (thoc2)
03041 Spliceosome [BR:
plep03041
]
121952848 (thoc2)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121952848 (thoc2)
Spliceosome [BR:
plep03041
]
Complex C
Other components
EJC/TREX
121952848 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121952848 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
121952848
NCBI-ProteinID:
XP_042355631
LinkDB
All DBs
Position
13:complement(24901569..24934642)
Genome browser
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFAQLCKELTEKTDHGSEIKDIQAALYELCWQVIQGNLKL
DLVTSVLGDMMELRDDMPSILADVFSILDLETGALEEKHKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYQSRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPVDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKDKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYASSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRNKRAPRPVENFE
DLHRDTFSMICYLGPHLSHDPILFAKIVRLGKGFMKEYQSEGRPEVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KAQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKTEEGASEDCDRGKDKSQGITKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKETTSKHHANYNSVARSKSREREVEKKDLDN
TQGRSKEKKEEKDRKDRKRDHTVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESLKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgcacaactctgcaaagaacttacagaaaaaacagatcatggaagtgagattaaa
gatatacaggccgccttatacgagctctgctggcaagttatacaggggaacctgaagttg
gatctcgtcaccagcgtcctcggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggtgcgctggaagaaaaacacaag
cgtgaccattacacacaactggtgggagcatgtttgttctttgttccggaggccatcctg
aaagagagactggatccagaaaccctcgaatcacttggtcttataaaacaagcccatcag
ttcaatcagaagattgttaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctacgccaaactaatcactgagcttggtcaagacctc
tcaggcaacatcaccagccaccttgtcctggagagcatcaaatccctcataggatgtttt
aatctggaccctaatcgtgttttggacataatcctggaggtgtatcagagtcgatctgac
caagatgagttcttcctgtctctcatcaagtcatacatgtgtgagccactcaccctttgc
cacatcctgggctttaagttcaaattctaccaggagcccaatgaggaaacgcccaagtca
ctttatcacattgctgctgctctgcttcatcataacctgatagagctggaagatctctac
gtacatcttatgccagtagatgccaccatcgtagaggaacacaaacgagatatctcagag
gccaagcagatagctcgcaagctggtcatggtcgtgttgccatcagagaaaagtgaagac
aaagacaaggagaaggataaagaggaggagaagaatgagaagccacctgataaccagaag
cttggtctgttggaagcactacttagaattggagactggcaccacgcccagagtattatg
gaccagatgccgtccttctatgcttcttctcacaaggccattgcgctggcactctgccag
cttgtgcacctgactgtggagcctctttacagaagagctggcctcccaaaaggggcaagg
ggatgtgtgatgcatccactgagaaacaagcgggcccctcgacctgtggagaactttgag
gacctacacagggacacattcagcatgatctgctaccttggccctcacctttctcatgac
ccaatcctcttcgccaagatagtgcgccttggcaagggcttcatgaaagagtaccaaagt
gagggcagacctgaggtcaaagacaaaatggaaacactattgagttgtttcctcagcatt
gcagaccaggtgctactcccttctctctctctgatggagtgtaatgcttgcatgtctgag
gagctgtggggtctcttcaaactctttccctaccagcacaggtaccggttatacggacag
tggaaaaatgagacgtactccagccatccattgttggttaaagtcaaagctcagactgtg
gaaagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccatagcaatcccaccatcctctttgattatatgctgtctcag
atccagtggtatgacaacctcattgttccagtggtggattccttgaaatacctcacatcc
ctcaactatgatgtcctggcctattgcatcattgaggctctggccaaccctgagaaggag
aagatgaagcatgacgacaccaccatctcctcgtggcttcagagcctggcaagtctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcagtatgtcaccaat
cagctaaaggcagggaagagttttgatctgttgatcctgaaagaggtggtgcagaaaatg
gctggcattgaaatcacagatgagatgacctcagagcagttagaggccatgaccggaggg
gagcaactcaaagctgagggtggctactttggacagatcaggaacactaagaagtcctca
cagcggctaaaggatgcactcctggaccatgaattggcattgcctctgtgtttactcatg
gcccagcaacgaaatggtgtggttttcttagagggtggagagaaacatctgaaacttgtt
ggccacctctacgaccagtgtcatgacacgttggtgcagtttggtggctttctggcctct
aaccttagcactgaggactacatcaagcgggttccctccattgacatcctttgtaaccag
tttcacactccacatgatgctgccttcttcctgtctcgcccaatgtacgcccatcagatt
ttgtctaagtacgatgagctgaagaaagcagagaaaggcaaccgacagcagcagaaggtc
cacaagtatgttgcagcctgtgaacaggtgatgacgccggtgcatgaggctgtagtgtcc
ctccacccagccagggtctgggacgacctccgccctcagttctacgccaccttctggtcc
ctcaccatgtacgaccttgctgttccacactctgcttacgatcgcgaggtcaacaagctc
aaggctcagatcaaggccatcgaggagaacccagagatacccatgaataagaaaaagaag
gagaaggaacgctgcactgccctgcaggaaaaactgcaggaggaggagaagaagcagctg
gagcatgtccaaagggttctccaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagaccataacaaagttccttcagctctgcctgttccctcgctgc
atcttctcttcgattgatgctgtgtactgcgcccgctttgtcgagctggtccaccagcag
aaaacacccaacttctgcaccctcctgtgctacgacagggtgttctcagccatcatttac
actgtggccagctgtacggagaacgagtctcaccgctatggacgcttcctctgctgcatg
ctggagacggtgacccgttggcacagcgatcgcgccatctatgagaaggagtgcgtcaat
taccccggcttcctgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
cagctggattatgagaacttcaggcatgttgtgcacaaatggcactacatgctgacaaaa
gcttcagttcactgcttggagacgggagactacacccacattcgaaatattctcatcgtg
ctcaccaagatcctaccctgctaccccaaggtcctgaacctgggccaagcgctggagtgc
cgtgtccacaagatctgccttgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
catcacaaggagcagccagcacgcagcgccacccccgccaatcaacagaacggccccggc
agcacaggcaagcccgccaccagcacaagcaagacagaggagggggcgtcagaggattgt
gatcggggcaaggataaatctcaggggatcacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgtcaaa
gagcgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcccgagacaaaggcagagaaccgccgggagaagcagagagacgagagagca
gggaaggaggagcgggcggcacgtgagggtaaggagaagacccccaaggcagacagggag
aaagtgaaggccgaggagaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccgtccagggagcgcgatgccatcaaggagtccaaaagcaaggagaaagga
gacaggagcgctgtggccgggtccctcaagtcaccagttcccagatcagagtcagccgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagaccacatccaagcaccacgccaactac
aattcagttgcccggtccaagagcagagagagggaggtggagaagaaagatttagacaac
acacaaggccgatccaaagagaagaaggaagaaaaggatcgtaaagacaggaagagagat
cacactgtcaatgaccgggagacaagccaggagtccaaacgcagaaaggacgagaatgga
acaaattcctccaaaaacagcaagagcacgagtccttcctgtgactccccactctctgct
gaaaaagagaagagcaaaagatccaaatcttccagtaaagagaaggccgagtcattgaaa
cctgagcggacgtcctctggaggcaaaaaggagtccagacacgataaagagaaatctgaa
aagaaagagaagagggacagcagcggaggaaaagaagagaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
