Plectropomus leopardus (leopard coralgrouper): 121952876
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Entry
121952876 CDS
T07454
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04140
Autophagy - animal
plep04148
Efferocytosis
plep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121952876 (vps11)
04148 Efferocytosis
121952876 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121952876 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121952876 (vps11)
Membrane trafficking [BR:
plep04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121952876 (vps11)
Hops complex
121952876 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
Beta-prop_WDR3_1st
zf-C3HC4_2
Beta-prop_WDR36-Utp21_1st
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
zf-ANAPC11
Beta-prop_EML_2
ADIP
Rab11-FIP3
zf_RING_Vps8_fungal
CC_Bre1
zf-RING-like
Kbp-5
Motif
Other DBs
NCBI-GeneID:
121952876
NCBI-ProteinID:
XP_042355667
LinkDB
All DBs
Position
13:28727205..28740428
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AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNFAVPSGISACDSGRGHIVLGDMDGKIWLMTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKIELDTHGCALRCSSLADPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDTKSPNKPGFGSRESSPSDKQLLTVYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGNMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSEGEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHI
PEGTTLLLKGLCTNYQPSGDTAEKDSLGRGRANKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSPQGVYDTLLELRLQDWAHEQDPVRKKVLQEEAVSLLKGDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLQHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKISQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagaaaatttgtcttctttgataaagacacggtaaaggac
ccggtggacaatggcaaaaactttgctgttccaagcggaatatcggcttgtgactccggc
cggggtcatattgttctgggagatatggacggcaagatctggctcatgacgcgctccctg
cagctgacttcttttcaggcatacaagctgcgtgtgacacatctctaccagctgaagcag
cacagcattcttgtgtcagtggggcaggatgaacacggaataaaccctttagtaaaagtg
tggaaccttgacaagagggacagtggaaatcctctgtgcacaaggattttccctgcaatt
cctggcaacaaaccgactgaagtgtcttgcctcggtgtgcatgaaaacctcaacttcatg
gctattggcttcacagacggcagtgtggttttgaccaaaggtgacatcaccagagatcgt
cacagtaaaactctgactctgcatgagggaagcagcccggtcacaggcctcgctttccgc
caggtggcaaaggtcacacatctgtttgtcgccactttggagaaagtccactgctacact
ctgtccatcaaggagtatcctaaaatagagctggatacacatggctgtgcgctgcgctgc
tcctccctggcagacccctcccaggactcccagttcatcgtggctggtgatgactgtgtg
tacctgtaccagcctgacgaacgagggccctgctttgccttcgatggacacaagctgttg
gcccactggcaccgcggatatctgtttttactcatcagggacacaaagtcacccaacaag
ccggggtttggcagcagggagagctctccatcagacaaacagctgctgactgtctatgac
ctggacaacaagttcatcgcctacagtgcctctttcgatgacgttattgatgtggtggca
gagtggggctccttctacatcctgaccagagatggaaacatgtttgttcttcaggagaaa
gacacacagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaat
ctggctaaaagtcagcacctggacagtgacggactgtcggagatcttcaggcagtacggt
gatcacctttacctgaagggagaccatgacggcgccatccagcagtacattcgcaccatt
gggaaactggagccatcatacgtcattaggaagttcttggatgcgcagaggatccataat
ctgaccgcatatctgcaagccctgcacaggcagtcactcgccaacgcagaccacaccaca
ctgctgctcaactgttacaccaagctgaaggacagctccaaactggaagagttcattaag
agcagtgaaggcgaggtccattttgatgttgagatcgccatcaaggttctccggcaggcc
ggctaccacagccacgctgttttcttggctgagaaacacatgcaccatgaatggtacctg
aagatccagctggaagacctcaagaactatcaggaagggctgcgttacatcggacgtcta
cctttcgaacaagctgagagcaacatgaagcgttacggcaaaacgctgatgcatcacatc
cctgaaggcaccacactgctcctgaagggtttatgcaccaactaccaacccagcggagac
actgcagaaaaagacagcctaggcagggggcgggccaacaaggccaactccgaggaattc
atcccaatttttgccaacaacccacgtgagctgaaagccttcctggagcacatgattgag
gtggacccccgctctccccagggtgtgtatgacacactgctggagctccggctacaagac
tgggcgcacgaacaggaccctgtgagaaaaaaggtcctgcaggaagaagcggtgtcactg
ttgaagggtgataacactgtgtttgataaggctttggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgaaaagggcaaactgtaccagcagattatgcactac
cacatgcagaatgaagagtatggaaaagtggtcgaggcctgcaagcgctatggggaccag
gagggatgcctctgggagcaggccttgggatactttgccagaaaagaggaggactgcaag
gcctacatcagtgaggtcctccaacacatcgaccaaaacaacctgatgcctccattactc
gtggtgcaaacgttggcgcacaactcgacagcaactctctccgtcatcaaagactacctc
atcaataagctgcagagggagagccagcagatagaggacgacgaacgcaaaatcagccag
taccgcgaagagacggctcacttgcggtccgagatccaggagctcaaaaccagtgcaaag
atattccaaaagaccaagtgcaacatgtgcaacagccccctggagctgccgtcggttcat
ttcctgtgcagccactcctttcaccagcactgctttgaaagctatgccgagagcgaggca
gagtgcccgacttgcactccagagaaccgcaaagtcatggacatgctgcgcgcccaggac
cagaaacgggatctgcacgaccacttcaacagacagttacgcagctctaatgatggtttc
tccgtcgtggccgactactttggtcgaggagtgtttaataaactgactctggtcaccgac
ccacctggcagcaaaactgtcgggagtctggaagtcaacctgcagagagacctgctcatc
cacacaaagagaaactgctaa
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