Plectropomus leopardus (leopard coralgrouper): 121953158
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Entry
121953158 CDS
T07454
Symbol
ptbp1a
Name
(RefSeq) polypyrimidine tract-binding protein 1a
KO
K13218
polypyrimidine tract-binding protein 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121953158 (ptbp1a)
03041 Spliceosome [BR:
plep03041
]
121953158 (ptbp1a)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121953158 (ptbp1a)
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121953158 (ptbp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121953158
NCBI-ProteinID:
XP_042356004
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All DBs
Position
14:complement(8831088..8849612)
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AA seq
576 aa
AA seq
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MDGRLDADLYPLGSGYVPEIEGVHDISVGTKRGSDELFSSCISNGPYIMNSANGNDSKKF
KGDVRSPGVPSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLELNSEECA
QTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGSMAI
PADATSMGGAGAQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQ
YADGMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQP
SIDHQTMAAAAFAAPGIISASPYGGAHAFPPTFAIQQAAGLSMPGIPSALTSLGVGHGGM
AAAAAAASRLGLSGFTATGGHNVLLVSNLNPESVTPHCLFILFGVYGDVMRVKILFNKKE
NALIQMSDGTQAQLAMSHLNGQRLHGRAMRVTLSKHTTVQLPREGHEDQGLTKDYSNSPL
HRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDELRRLFASSGATVKAFKFFQKDRKMAL
IQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgctgacttgtatcctctgggatccggctacgtccctgaaatt
gaaggtgtccatgacatatcagttggcacaaagaggggatccgacgaactcttttcttcc
tgcatatccaacgggccctatatcatgaactcagccaatggcaacgacagcaaaaaattc
aaaggtgacgtccgcagtcctggtgttccgtcacgtgtggtccacgtacgcaagctgccc
aacgacataaacgaggctgaagttattggcctgggactgccctttgggaaggtcactaat
ttgctgatgctgaaagggaaaaaccaggcattcttggaactgaacagcgaggagtgtgca
cagacgatggtgagctactactcctctgtcacccccgtcatcagaaaccacccaatttac
atgcaatactcaacccataaggagctcaagacggacaactcccccaaccaagtgcgggcc
caggcagctctgcaggcagtcaatgcactgcacggaggtggaatgggaagcatggccatt
cctgcagatgctactagcatgggaggagcaggggcccaaagccctgtgctcagagtcata
gtggaaaatctcttctaccccgtcaccctggatgtgctacaccagattttctccaagttt
ggcactgtgctgaagatcatcactttcactaagaacaaccagttccaggctctgatccag
tatgccgatggcatgacagctcagcacgccaaactgtctctggatggacaaaacatctac
aatgcctgctgtaccctgagaatcagcttctccaagctcaccagcctcaatgtcaagtac
aacaacgacaagagcagagattacacccgaccagacctccccactgcagactcgcagccc
tccatcgaccaccagaccatggctgccgctgcattcgctgctccgggcataatctcagcc
tctccttatggtggagctcatgccttccccccaacctttgccatccagcaggcagcaggg
ctgtcgatgcctggtattcccagtgctctgacgtccttgggtgtgggccacggtggcatg
gcagctgccgcagcagccgccagccggctcggcctgtcggggttcacagccactggggga
cacaatgtcttattggtcagcaatctgaaccctgagagcgttacgccacactgcctcttt
attcttttcggtgtgtacggcgatgtgatgagagtgaagatcctgtttaataaaaaggag
aacgctctgatccagatgtctgatggcacacaggctcagctagctatgagccacctgaat
ggccagcgtcttcacggcagggccatgcgtgtgacattatcaaaacacaccacagtgcag
ctgcccagagagggccacgaggaccagggcctcacaaaggactacagcaactcgccgctg
caccgtttcaagaagcccggctccaaaaattactccaacatcttcccaccctctgcaaca
ctccacctctccaacataccgccttctgtggtggaggatgaactcaggaggctttttgcc
agctcaggagccacagtcaaggccttcaagttctttcaaaaagaccgcaagatggccctg
atccagatgggctcagtcgaggaggcaatcgagtccttgatcgagttccacaaccacgac
ctgggagagaaccaccaccttcgagtgtccttctccaaatccaccatctga
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