Plectropomus leopardus (leopard coralgrouper): 121953345
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Entry
121953345 CDS
T07454
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04137
Mitophagy - animal
plep04140
Autophagy - animal
plep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121953345 (hif1aa)
04137 Mitophagy - animal
121953345 (hif1aa)
04148 Efferocytosis
121953345 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121953345 (hif1aa)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121953345 (hif1aa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
121953345
NCBI-ProteinID:
XP_042356313
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Position
14:complement(16615546..16636315)
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AA seq
748 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAQQLPLPHSVSSGLDKASIMR
LTISYLRMRKLLSTDEPMAEDETELDIQLNSSYLKALEGFLMVLSEDGDMIYLSENVNKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLVHKTGSKKTKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGHIRVYDNLTEESPNGHKEPSVPYLVLICDPIQHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQV
STGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEETLILSLEQTEDV
KPVKEEQLVEEKAVVESSQSDMSPTLLKEEEKGPELDVIKLFTRAVEAQPLASLYDQLKE
EPEALTLLAPAAGDAIISLDFSCPDSEIQLLKEDTLYNDVMLPSTSEKLALPLSPLPPSE
PLHVSTTSSEGAKAESFTPAPSTTSTSHSPSETDSPLDYCFPMDSEMSSDFKLDMVEKLF
AIDTEPKTPFTTQVMEGLDLEMLAPYISMDDDFQLRSLTPDEPLACGPVKSLESSPVDVT
QDIHSYPSSPFSAPGSRTASPAPLNPPHPVVIVAKRTPQLDKEVSLRTLAAQNAQRKRKL
GDIKDIIGQEQAEEGKKLKPSESGTTRTILLLPSDLASRLLGSTSEGTGSLFTLPQLTRY
DCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtacccgaaaagaaaagggtgagctcggagcggaggaaggagaag
tcaagggatgcagcgcgatgccggcgtgggaaggagtcggaggtgttctacgagctggcc
cagcagctgcccctgcctcacagcgtcagctccggcttggacaaggcttcgataatgagg
ctcaccatcagctacctgcgcatgaggaaactgctcagcactgatgagccaatggcagag
gacgaaacagagctggatatacagctaaacagctcctacctaaaggctctggagggcttt
ctcatggtgttgtctgaagatggggatatgatctatctctccgaaaatgtcaacaagtgc
ctcggcctggcacagtttgacctgactggacacagtgtgtttgacttcatacatccctgc
gaccaggaagagctgagggagatgctggtccacaaaacaggctccaaaaagaccaaggaa
ccaaacacagagcgcagcttcttcctccgaatgaaatgcactctcacaagcagaggtcgc
actgtcaacgtcaaatcagccacatggaaggtgctccactgctcaggtcatatccgtgta
tatgacaacctcactgaggagagtcccaacgggcacaaggagccgtctgtcccttacctg
gttttgatctgtgaccccatccaacacccctccaacattgaggtccctctggacaccaag
acctttctcagccgccatacaatggacatgaagttcacatattgtgatgagcggatcact
gagctcatgggttatgatccagaggacctgttgaatcgttctgtgtatgagtactatcac
gccctggactcagaccaccttaccaagactcaccacaacttatttgcgaagggccaggtc
agcacgggccagtacaggatgttggccaagagaggaggctttgtgtgggtggaaacacaa
gccactgtcatctacaacaataagaactctcagccacagtgtgtcgtctgtgtcaacttt
gtgctcagtggcatccaggaggagacactgatcctgtctctggagcagactgaggatgtg
aagccagtgaaggaggagcagctggttgaagaaaaggcagtggtcgagagcagccagtcc
gacatgtctccgaccctgctgaaggaggaggaaaaaggcccagagctggacgtgatcaaa
ctgttcactcgggccgtggaggcccagcctttggctagcctgtacgaccagctgaaagag
gagccagaggccctgactctgctggcgccagctgctggagacgcaatcatctccctggat
tttagctgccctgattcagagatccagctgctgaaagaggacactctctacaatgatgta
atgcttccctccaccagtgagaagctggctctgcctctctcccctctgccgcccagcgag
ccccttcacgtctccaccaccagctctgagggtgccaaagccgagagctttactccagcc
ccgtccactacatcgaccagccacagcccttcagagactgacagtccgctggactattgt
tttccgatggactcagagatgagctcagatttcaaactagacatggtggagaagctgttt
gccattgacacagagcccaagactccctttaccacacaggtgatggaaggcttagatctg
gagatgttagcaccctacatctccatggatgatgacttccagctgcgcagtctgacccca
gacgagcctttagcttgtggaccagtcaaatccctcgagagttctccggtcgacgtcaca
caggacatccacagctatcccagctccccattcagtgcaccaggcagtcgcacagcttcc
ccagcaccactcaatcctcctcatcctgtcgtcatcgttgctaagaggaccccacagctg
gataaagaagtttcgctcaggactctggcagctcagaacgcacagcgcaaaagaaaactg
ggtgacataaaagatattattggacaggaacaagcagaagagggcaaaaaactgaagccc
tcagagtcgggaacaaccaggaccatactgctgctgccctcagatttggcgagtcgtctg
ctgggcagcacatcagagggcaccggttcccttttcaccctgccacaactcacccgctac
gactgcgaggtcaacgcacccttgcagggtcgccagtacctgctgcagggggaggaactg
ctgcgtgctctggaccacgtcaattga
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