Plectropomus leopardus (leopard coralgrouper): 121953375
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Entry
121953375 CDS
T07454
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121953375 (srrm1)
03015 mRNA surveillance pathway
121953375 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121953375 (srrm1)
03041 Spliceosome [BR:
plep03041
]
121953375 (srrm1)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121953375 (srrm1)
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121953375 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
121953375
NCBI-ProteinID:
XP_042356359
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Position
14:22584589..22597516
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AA seq
862 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKADDDKKEKDKDIRERAQSKSPRRRKTRSPSPRRR
SPVKRERKRSASRSPRRKPSPVGSSSPPPPLMQLPTKPLEQLVEPDTLARALPEPVIQET
PATCDTVVEVVKADTVTEVKEPSPEKIHKKEERPRSREREKDSRRERPHHRSRSHSPRTR
RRRSRSRSYSPRRRPSPRRRMSPRRRSPPRRGPTSSRHRHRRSPVRRRRSRSASSSGSSS
SGSRSPKKAMKRISNTPPRKQVHHSDHPTSPTGKDRRSPSPRARRGRGSASPARSSGLKR
KQGGRGDSPSDNAKPRPSEGSDSEEDKNEKGATADSVQQRRQYRRQNRQSSSDTGSSSSE
DEAPKRPTAGPGARNGEVRRRRTRTPSPRRRHRDASPRKRRSPSPGRRRRTPSPPRRRRS
PSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKMSSSPTKRSSPGVKRRPS
RSPKRRSSPVQRRRMSPSSSPPRHRRSPMLPVRHSRDTRSPVAAASRLSPSPAHRSRAVR
GSTSPQGRFETSSASPSNQRRQQSPSHSGKPIRRVSRTPEPRNNQRPSPSPQPMRRASSR
SRSVSPQPAAQKRPAPASASPSPSRSVSGSPPPAKKASSGSGSQSPSKNSDVDSSAKKKK
KKKEKKHKKDKKHKKHKKHKKEKSGGTVTADGQENQAVEEDGESRKESDSEVEDSLDDLE
KHLREKALRSMRKAQMSPSQMS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggagcaagacaaccgtttcagcaacaag
cagaagaaactgctgaagcagctgaagtttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctggaagtcatcaaaccttggattactcagcgagtgacagagattctg
gggttcgaggatgacgtcgtcatagagttcatatttaaccagcttgaggagaagcaccca
gatagcaagatgatgcagattaacctgacaggcttcctgaatgggaaaaacgcccgggag
ttcatgagggacctgtggcccctgctgctgagtgcccaggagaacattgctggcatcccc
tctgcttttctggaacagaagaaagaggaaattaaacagagacagattgaacaggagaaa
ctagcgtctctgaagaaggctgatgatgataagaaggaaaaggacaaggacatcagagag
agggctcagtctaaaagcccaaggaggcggaagacaaggtcaccatcaccacggcgaagg
tcgccagtgaagagggaaaggaaacgtagtgcctcgcgttccccaaggcgtaaacccagt
ccagttggtagcagttcaccccctccacctctgatgcagctgcccacgaaacctttggag
cagcttgtggagccagatacattagcaagagccctgccagaaccagtcatccaagaaact
cctgccacctgtgacacagttgtggaggtggtgaaagcagacacagtgactgaagtcaaa
gagccttcgccagagaagattcataagaaggaggaaaggcccaggtcccgggaaagggaa
aaggacagcaggagggaaagacctcaccaccgttctcgttctcattccccccgcactcgc
agacgacgctcccgatctagatcctactctcctcgtagaagaccgagtcctagaaggagg
atgtctcctcgtcgaaggagccccccaagacgcggccccaccagctccagacacagacat
agacgctcccctgtccgcaggaggcgctctcgttctgcttcatcttctggcagcagctcc
tccggctctcgctcacccaaaaaagcaatgaaaagaatatctaacacaccaccccgaaaa
caggtccatcattctgaccaccccaccagccccacagggaaggacaggcgatcaccatca
ccacgggccagaaggggcagaggctctgcatcaccagccaggtcatctggtttaaagcga
aaacaaggtggaaggggtgattctccatctgataatgctaaacccagaccgtctgaaggg
tctgattcagaggaggataaaaatgagaaaggggcaacagcagattcggtgcagcagcga
cgtcagtatcgcaggcagaatcgacagtcgtcttcagatacgggctcttcgtcgtcagaa
gacgaagcacccaagaggccaacagctgggccaggcgccagaaatggggaagtccggagg
agacgcactcgtacgccctccccacggaggcgacacagggacgcctctccaaggaaaaga
cgttctccatctcctggacgcagacgtcgcactccgtctcccccacgacgccgcagatct
ccctctcctcctagacgaaggtctccctctccacctccccgtcgtcgttctccatccccc
agacgatattctccccctatccagcgtcgctacagcccctcacctttgcctccacagaag
aggaagatgtccagctctcccacaaaacgttcttccccaggggtcaagcgacgcccctcc
aggtcccccaaacgcagaagctctccagttcaaaggagacgcatgtctccatcatcctct
ccacccagacacagaaggagccccatgttgcctgtcaggcacagcagggatacaagatct
cctgtcgcagccgccagccgcctctccccgtcccctgcacaccgcagtcgcgctgttagg
ggttccaccagtcctcagggacgttttgaaacctccagtgcatctccatctaaccagcga
agacagcagtccccttcacatagtggcaaacccattcgcagagtgtcccgcaccccagag
ccacgcaacaaccagagaccgtctccaagtccccagcctatgaggagagcatcctccaga
tcaagatctgtttcccctcaaccagcagctcagaaacgtccagcgccagcgtccgcctcc
ccgtcaccgtcacgctcagtcagtgggtctccaccaccagccaaaaaagccagcagtggt
tctggcagtcagtccccaagcaagaattcagatgttgacagcagtgcaaagaagaagaaa
aagaagaaggaaaagaaacataagaaagacaagaaacataagaagcacaagaagcataag
aaggagaagagtggcggcacggtgaccgcagacggtcaagaaaaccaggctgtggaggag
gacggagagtcaagaaaggaatcagacagtgaagtagaggacagcttggacgacctggaa
aagcatctgagggaaaaggccctgcgttccatgaggaaggcccagatgtctccatcacag
atgtcctga
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