Plectropomus leopardus (leopard coralgrouper): 121954299
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Entry
121954299 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121954299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121954299
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121954299
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
HECT type E3
121954299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121954299
NCBI-ProteinID:
XP_042357623
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All DBs
Position
15:23678132..23692410
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AA seq
1047 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKQVCDVGCGHRHTAFLLEDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIIVAVSCGESHTLALNDKGQVFSWGQGSDGQLGLNN
FEECVRVPRNIKSLSDVQIAQVACGFWHSHALSRGGQIFSWGQNRCGQLGLGISGQSIST
PQIIQSLQGIPFARISAGGAHSFALTFSGAVFGWGSNKFGQLGLNDSNDRYFPTLLKSLR
SQRVIYIACGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNVVTQIS
CGRQHTIAFTPSCGKMYSFGLGGNGQLGTRSTCNRKSPAPVKCSWVASNSPTDSDSGQGC
CVKRIYAGGDQSFAHYCTANKLHNIDDVRIQDSHRTILTLNQEVIERWWNHSPGRLPQEI
ANEIDLVFSSASCLNGSFLSKSHPDHYSTSSKCSGVDMNTARLLFHRLVQQDHPEIAQQI
AASLEKHLIPRLGSSPPDIEALRLYLTLPECPLFSDRNNYVTISIPFAKSLLNLKEAPLK
VLGNWWSRFEPQVFQRLVELYKEVVVYLLQMHKMGIPSVEQRIFTCFLDTSLRLLEILHT
VSERAGHIIQYDKFYIHELDDLIDIRNDYVTWIQRQMYPMGHDGVVTLCRYPFVFDAQAK
TTLLHTDAVIQMQMAVDQAQMQNFSSMFLPAVESVNPCLILIVRRENIVGDTMEVLRKSK
NVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPKYGMFRYYEESRLIWFSNKTFE
DIDLFNLIGVICGLAIYNLTIVELNFPVALYKKLLKRKPTLDDLKELMPDVGRSLQHLLD
YTEDDLEDIFCLNFTITEENYGATEVLELVRGGEDIPVNKSNRQDFVNAYVDYVFNTSVA
PLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWTELEKSTEYKGEYWADHPTIR
LFWEVFHSLPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLD
LPKYTSLETLREKLLQAIEHNQGFNLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggaaatgcctcctacgggcagctgggtttaggtgggattgatgaagag
attgtggtggagccacgaaaatgtgaattctttcacgggaagcaagtgtgtgatgtgggg
tgtggccacagacacacagccttcctgctggaggatgggacagtgtacacctgtggctgc
aatgacctaggacagctgggacatgagaagtccagaaagaaaccagaacaggtagtggcc
ctggatgcacagatcatagtggcagtgtcatgtggagagtcccatacactcgccctgaat
gacaaagggcaggttttctcgtggggccagggctcagatgggcagctgggcctaaataac
tttgaagaatgtgttcgtgtgcctagaaatatcaagagtttgtcagatgtacaaattgct
caggtagcctgtgggttttggcactcccacgcactttcgagaggaggccaaatcttctcc
tggggccagaatcgatgcggacaactcgggctgggaattagcggacagagcatttccacg
ccccaaatcatccagtctctgcagggcattccttttgcccggatatcagcaggcggcgct
cacagctttgccctcactttctcaggagcagtgtttggttgggggagcaacaagtttggt
cagctgggactcaatgacagcaatgatcggtatttcccaaccttgctgaagtcccttagg
tcgcagagagtgatctacatcgcctgtggagaggatcacacagcagcactgaccaaggaa
ggaggtgtgtttacatttggagcaggaggatacggacaacttggacataactccacaaac
catgaaatcaaccctaggaaagtgtttgagctcatgggaaatgtagtcacgcagatttca
tgtggaaggcagcacacgatcgctttcacgccctcctgtgggaagatgtactcgttcggg
cttggtggtaacgggcagcttggtactcgctccacttgcaacagaaagagccccgccccc
gtcaaatgctcctgggtagcctccaattctccaacagattcagactcggggcagggctgc
tgtgtcaagaggatttatgccggaggagaccagagctttgcccactactgcactgccaat
aaactccacaacatagatgacgtgaggatacaagattcccacagaacgattttaaccttg
aatcaggaagtcatagaaaggtggtggaatcactcacctggaagactcccgcaagaaatt
gccaatgagattgacctcgtgttctcctcagcaagctgcctcaatggatcttttctgtca
aagagtcatccagatcactacagtaccagcagtaaatgttcgggggtggatatgaacaca
gctcgcctcctgtttcacagactggtccaacaagatcaccctgagatcgctcagcagatt
gctgccagtctggaaaagcacctcattcccagactaggcagctctcctccagacatcgaa
gccctgagactctacctcactctaccagaatgccctctcttcagtgaccgaaataattac
gtgaccatctctatcccgtttgccaaatcactcctcaatctgaaagaggctccgctgaag
gtgctaggaaactggtggtccaggtttgagccccaagtcttccagcggcttgttgagttg
tacaaggaagtggttgtgtatctgcttcagatgcacaagatgggcataccctcagtggag
cagagaattttcacctgtttcctggacacgtccctcagactcctggagatcctgcacacg
gtgagcgagagagcgggacacatcattcagtacgataaattctacatccatgagttggac
gacctgatagacatcagaaatgactacgtcacatggattcagaggcagatgtacccgatg
ggtcatgatggcgtggtgactctgtgcaggtatccctttgtgtttgatgcccaagcaaag
accacgctgcttcacactgatgccgttatacagatgcagatggcagtagaccaggcacag
atgcaaaacttcagctccatgttcctgccagcagtggaatctgtcaacccgtgcctcatc
ctcatcgttcggagggaaaacattgttggagacaccatggaagtcctcaggaagtccaag
aatgttgactacaagaagccactcaaggtgatctttgtgggagaggaggcggtcgatgca
ggaggtgtgagaaaggagttcttcctcctgatcatgaaagagctgctggatccaaaatat
gggatgtttcgttactacgaggagtccaggctcatctggttttcaaacaagacttttgaa
gacatcgacttgttcaacctcatcggggtcatctgtggtctggccatctacaatctgact
atagtggagctcaacttccccgtggccctttacaagaagctcctgaagaggaagccgacg
ctagatgacctcaaagagctaatgccagatgtgggaaggagtctgcagcacttactggac
tacacagaggacgacctggaggacatcttctgcttaaacttcacaatcacagaggaaaac
tatggcgccactgaggtcttggaattagttcggggcggcgaagacatccctgtgaataaa
tcaaacaggcaggactttgtcaatgcgtacgtagactacgtttttaacacatcagtggcg
cctctgttcgagtgcttctacgctggcttccacaaggtgtgcggcggaaaagttttagag
ctgttccagccaaatgaactgcaagcaatggtcatcggcaacaccaactatgactggaca
gagctcgaaaagagcactgaatacaaaggggagtactgggcggaccatcctaccatcagg
ctcttctgggaggtgttccacagtcttccgttagagaagaaaaagcagtttctgttgttc
ctcacaggaagtgaccgtatacccattttgggcatgaaaagcctgaagctggtgatccag
cccacaggtggaggagagcattatttgcctgtcgcccacacctgcttcaacctgctggac
ctgcccaagtacacgagtctggaaaccctccgtgagaagcttctacaggctatagaacac
aatcaaggttttaatctagtctga
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integrated database retrieval system
