Plectropomus leopardus (leopard coralgrouper): 121954605
Help
Entry
121954605 CDS
T07454
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121954605 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121954605 (ercc6)
03400 DNA repair and recombination proteins [BR:
plep03400
]
121954605 (ercc6)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121954605 (ercc6)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121954605 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DegQ
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
121954605
NCBI-ProteinID:
XP_042358143
LinkDB
All DBs
Position
15:complement(16636999..16653945)
Genome browser
AA seq
1448 aa
AA seq
DB search
MPVDGSEDQVPSSLSSPASAALTPGGTEEDGATGGSAVCSFPENSQGTEAASAYPVSTGP
GEGNSGGKRSGALLQINRQRIQAASASSGADELGELGVAVYDQDVLEQGVLQQVDEAIQE
ASHAAAKAEAEKEYHSVLDDVRSVTASLKQINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVKAKQKRLQAILGGEGAERVEAELLAEDDEEEEAGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIPQKEEKKEPRKVMLAENSAFDLYLADQAKMATERRRVPLLKKKSS
SSLSPGDKAKGKINIIVSPSKNKKLKKRMRKLQITALKAHPKARPKAEPQLPKPKRKGHT
EGEETDSEESEYLPSDEGIDPDQEEREAMEEGFGEDDEEEYELKPYKKKREGKGRKKVMK
KEESEEEYCPESSDEEEESKGKVKKNKDDGDVEYYRQRIRRWKRQRLREREEKRERGELT
DDSDEEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIISFL
AGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSYTSN
KQKLIPEIASCHGIVITSYSAVRNMQDILQRYDWHYVILDEGHKIRNPNAGVTTACKQFR
TPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQT
AYKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVY
QILNGDMQVFSGLIALRKICNHPDLFSGGPRMLRGIPEDQLTKEEHFGYWKRSGKLIVVE
SLLRLWSKQGHRVLLFTQSRQMLDILEVFVTENNYSYLKMDGTTTIASRQPLIARYNEDK
SIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSDPDGNQGTETSAIFAGT
GSDVKAPKKPSKPRPSHTVNHSSYKHKHSSANQNETGTDSRQSATNIPAFRDGNNSPCVK
NSPGKPNSPTNGQSINQNGLDAEPNNSANTQRTGQNNRDWDAAKPAVKNSNSSSSHQYRD
KDSALSSPQKHREKRKHCDSADSDKHKRRKHSKDSRFEGHRISHLVKKRTYKRADNEDEA
EKKSDEYVLAKLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKISRQQC
RLAFNRPPPPPARKRFGQKNNSFLVAPSVQSVPTPSKCKDAAIVKKSMSKKPGSGAHFSG
EGIESDSTSAPLSSSSLLAKMKARNHLSVPSSQREEAEEEEGGSGAPGTSSPPAPPTEHD
ELLVDVRNFIAFQANVDGQATTQEVLEYFKPRLTEKQAPVFRELLRSICDFHRASGQEGV
WRLKESFR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacggttcagaggaccaggtgccctcctctctctccagccctgccagtgct
gctctcacccctggagggacagaggaggatggggccacagggggatcagcagtctgctct
ttccctgaaaacagtcagggcactgaggctgcttcagcttatcctgtcagcacaggacct
ggagagggcaacagtggtggtaagaggtcaggagcactactgcagatcaaccgacagcgc
atccaagcagcatctgccagttcaggggctgatgaacttggtgaactcggtgtggctgtg
tatgaccaggatgtccttgagcaaggtgtcctgcagcaagtggacgaggctatccaggag
gccagtcatgctgctgccaaagctgaggcagagaaggaataccactctgtgctcgatgat
gtcaggtctgtcacagcatctctgaaacaaatcaacaagattatcgagcagctgtctccc
tacgctgcctccagcaaagatatcagcaggaagattgaatctgtcaaacgacagaaagaa
aataaggagaaacagctgaagaaagtcaaagccaaacaaaagcgacttcaggccattctg
ggaggagagggtgcagaaagggtggaggctgagctcctggccgaggatgatgaagaagaa
gaagctgggccgtccacactgggcagcatgctcatgcccgctcaggagaccgaatgggaa
gagcttatccggaaaggtcacatgactccttttggaacacgaatcccacagaaggaggaa
aaaaaggagccccgaaaagtgatgcttgctgagaactctgcctttgacctgtacttggcg
gaccaggcaaagatggctactgagaggaggagagtccctcttctaaagaagaagagtagc
tccagtcttagccctggtgataaggccaagggaaaaattaacattattgtttccccttcc
aagaataaaaaactaaagaagcgcatgcgaaagctccagataactgctctaaaagctcat
cctaaggctcggcccaaggctgagccacagctcccgaagccaaagaggaagggccacact
gaaggagaggagacagacagcgaggagtcagagtacctgcccagtgatgaaggcatagat
cctgatcaggaggagagagaagccatggaggagggctttggggaggacgatgaagaggaa
tatgaattgaaaccatacaagaaaaaaagggaagggaaagggaggaagaaggtaatgaaa
aaagaggagagtgaggaggaatactgccctgagagttcagatgaagaggaggaatccaag
ggtaaagtcaagaaaaacaaagatgatggagatgtggagtactacagacagagaataagg
agatggaagcgacagcgtctacgagaaagggaggagaagagagaaagaggtgagcttacg
gacgacagtgatgaagagttcgacgaaggctttaaagtgcctggtttcctctggaaaaaa
ctttacaagtaccagcagacaggtgtgcggtggatgtgggagctccactgtcagcaggca
ggcggcatccttggagacgagatgggattgggtaaaaccatccagattatcagctttctg
gctggactgagctacagcaaactgaggactagaggatccaactacaggtacgttggtctg
ggtccgaccgtcattgtgtgcccagctacagtcatgcatcagtgggtgaaggagtttcac
acctggtggcctcctttcagagtcgctgttctgcatgaaactggctcatacaccagcaac
aagcaaaagcttatcccagagattgcatcatgtcatggcatcgtgattacctcatattca
gctgtgaggaatatgcaggacatcttgcagcgatatgattggcactatgttatactggat
gaggggcataagatcaggaacccaaatgctggagttaccactgcctgcaagcagtttcgc
actccccacaggttcatcctgtcaggctctcccatgcagaacaacttgaaggaactgtgg
tctctgtttgactttgtcttccctggcaaactggggacattgccagtcttcatggagcag
ttctctgtgccaatcaccatgggaggatacagtaatgcctcacctgtacaggtccaaaca
gcatataagtgcgcctgcgtgctgagggacaccataaatccttacctgctcagaagaatg
aaagcagacgtcaaggccaacctctccttacctgacaaaaacgaacaggttctgttttgc
agattaacagaggaccagcggcaggtttatcagaccttcttagattccaaagaggtctac
cagatacttaacggggacatgcaggtattctcaggtttgatagcgctacgcaagatctgc
aaccatcccgaccttttctcaggtggcccccggatgttgaggggaatcccagaggaccag
ctaactaaggaggaacactttggctattggaaacgctcaggcaagctgatagttgtggaa
tctctgctgcgactctggtctaaacagggccacagagtcctgctcttcacgcagtccaga
cagatgttggacatcctggaggtatttgtgacggagaataactactcgtacctgaaaatg
gacggcactaccacaatagcttcccgacagcccctcatcgctcgctacaacgaggacaaa
tccatttttatcttcttgttgaccactaaagtcggtggtctgggagtcaatctgactgga
gccaacagagtcatcatctatgacccagactggaaccccagtaccgacacacaggcaagg
gagcgagcgtggagaatcggtcagaagcagcaagtgacggtctatagactgctgactgca
gggaccattgaggagaaaatctaccacaggcaaatcttcaaacagtttctgaccaaccgc
gttctgaaggaccccaaacaaagacgtttcttcaagtctaacgacatctatgagctcttc
actctgtctgaccctgatgggaatcaggggacagagacaagtgccatatttgcaggtaca
ggctctgatgtcaaggcacccaagaaaccttcaaaaccaaggccatcacacacggtaaac
catagcagctataaacacaaacactcctcagcaaaccagaatgaaaccggtacagacagc
agacagtctgcaacaaacattcctgcatttagagacggaaacaattctccgtgtgttaaa
aactctccgggtaaaccaaatagcccaacaaacggtcaaagcatcaaccaaaatggcctg
gatgcagagccaaataattcagcaaatacacagcgtacgggacaaaataacagagactgg
gacgcagccaagccagcagtgaaaaactccaactcatccagttctcaccaatacagagac
aaagactctgctctgagtagcccacagaaacacagggaaaagaggaaacactgcgactcg
gctgactcggacaaacataaaaggcgtaagcactccaaggattctaggtttgaaggccac
cgcatttctcacttggtgaagaaaaggacctacaagagagcggacaatgaagatgaggca
gagaagaaatcagacgagtatgtcttggcaaagctctttaagaaatctggtatccacagt
gtgatgcagcatgacaccatcatggagtcctccaaccctgactatgttttagtggaggct
gaagccaacagggtggctaaagacgccctgaaagcacttaaaatttctcgccagcagtgc
aggctggccttcaatagaccccctcctccacctgcaaggaaacggtttggacaaaagaat
aattcttttctagtcgcaccttctgttcaatctgtccccactccaagcaagtgcaaggat
gctgctattgtaaagaagagtatgtcaaagaagccaggttcaggagctcatttcagtggg
gaggggatagaaagtgactcaacctccgccccgctctcctcctcctccctgctggccaag
atgaaagcccgcaatcacctcagcgtgccctccagccaaagagaagaagcagaagaagag
gagggtggctctggagctccaggaacgagctcccctccagctccgcccaccgagcacgac
gagctgctggtggatgtgcgcaacttcatagccttccaggcaaatgtggacggacaggcc
actacacaggaagtgcttgagtatttcaaaccaagactgacggagaaacaggcgcctgtc
tttagagagctgctcaggagcatctgtgatttccacagggcttctggtcaggagggcgtg
tggagactgaaggagagcttccgctga
DBGET
integrated database retrieval system
