Plectropomus leopardus (leopard coralgrouper): 121954857
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Entry
121954857 CDS
T07454
Symbol
cdhr1a
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121954857 (cdhr1a)
Cell adhesion molecules [BR:
plep04515
]
Cadherins
Cadherin related
121954857 (cdhr1a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
121954857
NCBI-ProteinID:
XP_042358519
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Position
15:14321707..14339814
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AA seq
873 aa
AA seq
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MTXLSRMKNVKILHLPLLFVFVHACFAQADFAPYFFDNGPYSYNGNLALFSLSEDTPVGT
QIYCLNGTDPEGQDVRYGLSFDPGSKEYFRVDPKSGNITLVEQLDREKQDSIDVLVSITD
GKSKVVERVTIFVMDANDEKPEFQNMPAIIDVLETTASGSSIYKVEAVDRDTGSGGSVTY
YLQNPQSTLFAMDRHSGVLRIKSGEMLDYEKTKTHFVTVIAKDGGGNFNGKEQFMSSSAT
LTINVIDAQDTPPTFIGTPYFGYVYEVSVPGSEIFAVIAKDGDVGNPNPICYSFDDGDDG
VFSINKTSGLIRLLTLPMFLKREIFNIKVKASEVSPEGRLMDYSITTVVIRVVDLNNNPP
TFYGEKGPQNMFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLIGPGRMLRVVPQ
TVLNEAQVTILVEDSAAMDYEKHHFLTYKLLAVEVDTPERFSATADVVIHLLDTNDNAPK
FSSDYYIARIPENSPGGSNVVSVTATDPDSGPWGEVKYSIYGSGADLFLIQPASGIIYTQ
PWASLDAEVRSKYNFYVKAEDAEGKYSLAEVFVTVLDLNDHPPEFNDNFLETTMVIGAPV
KIEAVDDDAEVPNNVIEYAIMKADPDNNIFDIDADTGEIMLKSYIKSMAIIQNITKQRDC
TWSLVVQARDRGQPSFSTTAVIKIDITEATELNGGPLGSFLMQSRNKPLQILGMLAGVIS
LMVIITVIISTATFMRNKKSNRILPNRRVRRRPRKQPWNFKNPLKAAETPGEKFRVEEEE
PEPEPEVIVENVNYNNNVGNVVRHWPPPPCAPSLPPPPPSYIPGERQWAVPTVSATVAPK
PRKKPVMNRQDTKNLALVSELKLRLEQKRMLKQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacttaactctctaggatgaagaatgtaaagatattacatttaccactgctttttgta
tttgtccacgcctgctttgcacaagcggactttgccccctatttcttcgacaatggaccc
tacagctacaacgggaacctggcacttttcagcctctcagaggacacgcccgtcggtaca
cagatctattgtctcaatggcacagaccctgagggccaggatgtgaggtacggcctttcc
tttgatccagggtcaaaagaatatttccgggtcgaccccaaatctggaaacatcacattg
gtggagcagctggacagagagaaacaagattctatagacgtccttgtcagcatcacagat
gggaaaagcaaggttgtggaaagagtcacaatatttgtaatggatgcaaacgatgaaaaa
cctgaattccaaaacatgccggcaatcattgatgtattggaaacaactgcgtctggcagc
agcatctacaaagtcgaggcagtggacagagacacaggctcagggggttcagtcacctac
tacctccagaatccacagtccactctgtttgccatggacagacatagtggcgtccttcgt
atcaagtctggagaaatgttggactatgagaaaacaaagacacactttgtcactgtcatt
gcaaaggatggtggtggcaattttaatggcaaggagcagtttatgtcctcctctgctacc
ctgaccatcaatgtgatcgatgcacaggacactccgccaacttttattgggacaccatat
tttggctacgtttatgaagtctcagtgccaggatctgaaattttcgccgttatagctaaa
gatggcgatgtgggtaacccaaatcccatctgttattcctttgatgatggtgacgatggt
gtttttagcatcaataaaacaagcggtctcatcaggctgctgacgctccccatgtttctg
aagagagaaatctttaacattaaagtcaaagcatcagaagtaagtcctgaaggcagactc
atggactatagcataaccacagtggtgatccgtgtggtggacctcaacaataatccacct
actttctacggggagaaaggcccgcagaacatgtttgagttgaccatgtatgagcatcca
ccagagggagagatactccgggggctgaaaatcactgtcaacgactctgatcagggtgca
aatgctaaattcaatctgagactgattggaccaggaaggatgctgcgagttgtccctcaa
actgtactcaatgaggcccaagtcacaatcttagtggaggactctgctgccatggactat
gagaaacaccactttctcacatataagctgcttgcagttgaggttgacacacccgagaga
ttcagtgcgacagcagatgttgtcatccatctcctggacacgaacgacaacgcccccaaa
ttctcctcagattactacatcgccagaattccagaaaactcacccggcggctctaatgtg
gtgtcagtcacggcaacagacccagactcaggaccttggggtgaagtaaagtactccatc
tacggatcaggggctgacttgttcctgatccagcctgcctctgggatcatctacacacag
ccgtgggcgagcctggatgcggaggtgaggtccaagtataacttctatgtgaaggcagag
gacgcagaggggaagtacagcctggctgaggtctttgtgactgtattggacctaaatgac
catccacctgaattcaatgacaacttccttgagacgactatggtgattggagcaccggtg
aaaatagaggctgtcgacgatgatgcagaagtgcccaacaatgtcattgaatacgccatc
atgaaagctgatccagacaacaacatctttgacattgacgccgacacaggagagatcatg
ctcaagtcctacatcaagtcaatggccatcattcagaacatcacaaagcagagagactgc
acctggtcgctggtggtgcaggcgcgcgaccgaggccaaccgtccttcagcaccactgcg
gtcatcaagatcgacatcactgaggctactgaactcaatggggggcctttgggatcattt
ttgatgcagagtagaaacaagcctttgcaaatcctaggcatgcttgctggtgtcattagt
ctcatggttataatcacggtcatcatctccactgcaacattcatgcgcaacaaaaagtcc
aaccgcatcctgcctaaccgccgcgtgagaaggaggccgcgaaaacagccgtggaacttc
aaaaaccccttaaaggctgcagaaactcccggagagaaattcagagtagaagaggaagag
ccagagccagagccagaagtcatagtggagaatgtcaactataacaacaatgtgggcaat
gttgtgagacactggcctccgcctccttgtgccccatcacttcccccaccaccaccttcc
tacatcccaggggagaggcagtgggccgtacccaccgtctctgcaaccgtggcacccaaa
cccagaaagaagccagtgatgaacagacaggacacaaagaacttagcgctggtttcagaa
ctcaagctgagacttgagcagaagaggatgttgaaacaataa
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