Plectropomus leopardus (leopard coralgrouper): 121955313
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Entry
121955313 CDS
T07454
Name
(RefSeq) histone deacetylase 2-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03082
ATP-dependent chromatin remodeling
plep03083
Polycomb repressive complex
plep04110
Cell cycle
plep04330
Notch signaling pathway
plep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121955313
03083 Polycomb repressive complex
121955313
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121955313
04350 TGF-beta signaling pathway
121955313
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121955313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121955313
Enzymes [BR:
plep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121955313
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121955313
HDAC complexes
Sin3A-HDAC complex
121955313
BRAF-HDAC complex
121955313
REST complex
121955313
SHIP complex
121955313
MiDAC complex
121955313
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121955313
Heterochromatin formation proteins
Other heterochromatin formation proteins
121955313
Chromatin remodeling factors
NuRD complex
121955313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121955313
NCBI-ProteinID:
XP_042359135
LinkDB
All DBs
Position
16:complement(27467631..27483048)
Genome browser
AA seq
489 aa
AA seq
DB search
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK
ATAEEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYE
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTQEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAIPDDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGEGGRKNVANHKKGAKRPRVDEEKKEGEEKKTEIKEEEKTKESSAEKTDSKS
VKNEQTSSA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcttacacgacagcgggagggactaagaagaaggtctgctactactatgacggtgac
attggaaattattactatggacagggacatcccatgaaaccacatcgtatccgaatgact
cacaacctgcttctcaactatggactatacaggaaaatggagatatatagaccgcacaaa
gccacagcagaggagatgacaaaatatcacagtgacgattacatcaagttcctccgatcc
atacggccggacaacatgtccgagttcagcaagcagatgcagcgcttcaacgttggagag
gactgtcctgtgtttgatggcttgtttgagttctgccaactctctgccgggggctctgct
gctggttcggtgaagttaaacagacagcagactgacattgccgtgaactgggctggagga
cttcaccacgcaaaaaagtctgaagcctccggattctgctatgtcaacgacatcgtgctg
gccatcctggagctgctcaagtaccaccagagggtgctgtacatcgacatagacatccac
cacggggacggagtagaggaggccttctacaccacagacagagtcatgactgtgtccttc
cataaatacggggagtacttccctggaaccggagacctcagggatatcggagctggaaaa
ggcaaatattacgctgtcaacttccccctgcgcgacggcatcgatgatgagtcatacgag
caaatcttcaaacctgtgatggccaaggtgatggagatgtaccagcccagcgccgtggtg
cttcagtgtggtgcagactctctctcaggagatcgcctcggctgcttcaacctcaccatt
cgaggtcatgccaagtgtgtggagtacatgaagtccttcaacctcccgctgctcatgctg
ggtggaggaggatacactatccgcaacgtggcccgctgctggacctacgagacagccgta
gctctggacacggacatccccgacgagctgccatacaatgactactttgagtactttggg
cctgacttcaagctgcacatcagcccctccaacatgaccaaccagaacacacaggagtac
atggacaagatcaagcagcgactgtttgagaacctgcgcatgctgcctcatgctcctgga
gtgcagatgcaagccatccctgaggacgccatcccagacgacaccgtggatgaggacaca
gaggaccctgacaaacgcctgtccatccgcgccacagataagaggatagcctgcgacgaa
gagttctctgactctgaggacgagggcgagggaggcaggaaaaacgtggccaatcacaag
aagggagcaaaaaggcccagagtggacgaagagaagaaggagggagaggagaagaaaacg
gagattaaagaagaagagaaaacaaaggagagcagcgctgagaagactgactcaaaaagt
gtgaagaatgagcagaccagcagtgcctga
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