Plectropomus leopardus (leopard coralgrouper): 121955424
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Entry
121955424 CDS
T07454
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121955424 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121955424 (rev3l)
Enzymes [BR:
plep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121955424 (rev3l)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
121955424 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
121955424
NCBI-ProteinID:
XP_042359313
LinkDB
All DBs
Position
16:complement(26969229..27062710)
Genome browser
AA seq
3043 aa
AA seq
DB search
MFAVRIVTADFYLASPIKDLDVCYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGYGQQSERYLRQVAFSIDRALNVAMGNPASSIQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQMVKRVCELLQSGAVMNKSYQPHEGHIPYLLQLFIDYNLYGMNMVNLAAV
KFRRGPNKEDAPAAPDRESPSSRPSISPWKSPITSKLNDSTLGGTFVRWEENAIPCSLVL
DEVQKQSTCELEVDAVAVDVLNRMEIENQIGRNPGLQAIWEDEKQRRREKNQASQIETPE
SQDRGFVTSTESEKIFMRRFKEILKENEFDVTQSSSVVDGEDQEDLLSALTLHSVPLTAE
GLPCTPANAVEVHRNSQPDSVRSSGKVPEEAVVDEEAILSLLENSQTFLPLSQTSSHSPL
LDSSQDQAIIDLLAGLENDGFCRTPIRQNSQSQSVPGASNYHCNSDEEEEGPELDKVEAE
LSVIMSQRWDSEAPENSPMPRPGVKEPEDCFSDEQQESSDEDMEWSGNNSLFANLSIPQL
DGAADESSDSSLTDSGSRTQSSVIVTEKMLGKRNPFSGETVHLEPPSSAKILLECKHPEH
RPVHVLDTEQPIDKHFRSKSSQDSSSECSTGFKFNKEIPYILPVKHPIPCKLPSHPEVSP
ICVDKQDIRPLYTYDKKTSRALDKTDLEGFPFGNGKVTKNGKKYGSIKNVETNCLSILQN
HRTFSLCYSELRNCSAKTELELSQKDSKSPILRNISSAPSPMVEDEFLDPQGEEIGQDSE
EGDVGELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLNRKKAGSKKLSDPCSKL
EQAQPRRSRLKLYKKRLGMSGQRSKVSIVESSTSDSQDSTGLTSTTPVTADTEMPALEDK
PVEEAEPIKDWSVKKGGSITKEEPESEEMSVNEQTEPLSEPSANMVSSSSEEAKESVEDR
LSPLHELSAKVTCTKPSTLPGSKYSLRVKRKMIYDSEDGEYSGATRSKNQASVKDRLKEA
NVPSGQEVKGQKRRKKEPPIIIKYIIINRFKGQKNMLVKMSKVDVEEQSVLLTPNKLEQY
NKLAPLKDFWPKVPESTAVKFPVTEPKAKKHPKRKAKVNSTNKKTVGNSSKPRVRQGEKA
KRTNGCQRGPILPSLPPPRPCYCELVDDHDTEYTDVMVELGYLSDRPPSPINSTPPRCWS
PSDPLMDTKSSEQLINPLSDPCLSSAFHTSHTVSSTKGIRNKCQTAKPKKSTDTKHKVSK
PVSKPQKEEEPKKMKPRQRNEAAPKQKKKAKDTAESTVSTPSTTTKPSKSRKKKTEEPKS
HDLSNESSQLLFPEDELPPSESSSQDIPPFQQPVSTDGSGQGSCQPTSTSDSNSVAQSVE
PKAEDCETSIMEVNQGFSAPAQMKQQGCQTTVVKAEASQEECTTPPAPLTGRPLLKDRKD
SQLEAGSPPSGPKNGEIPTLSETPSGLAVLKQLLQKRQQGQALPLQVVGTDSHSTAIAQA
AALLDPTVKPAKSRKAPSTTSRKPRAPKSATPKDKKPRIRKGKTSSTQPNLSVKQEGYLS
DDCPIFLSEPGMDNCNFIEDSLSPELPHNYTFDINAIDQTEFSSPYSGSQFVLTDKNLPV
KFLSDVSQEAVSAQALGLEKKPDRLLDSGEELQKGSDWHKARPASPDLFDRPENGESVSN
HLTFLDSEKIKSREWDFSLGKTHTLSPFQDFHCERKELLFSVFDPVQPLPLSSASFVEHE
GSPTGELLDGIDGLTSTTPSSSPRSISSLSQVRASQLLRGAGGGAHVLKPLMSPPSREEI
LSTLLDLEMSEATFQEPFCSNPSDAPGKPMEVGGRKLTVRTRLAKELAEFSGDLSLEGLH
FWKTAFSAMTHPAVTITSSSQARGAEASEANKEAELDSSSASDKKVILLPCKNPPSRERV
QLWLEARKQYESLQKGLLKKGRVGPDMEGNSERTEQTAASSCPAVKVELCERLSSIRTQR
RKKCNLSLIIPPLDNTVCKSTELSPVSDEGSVDTEQEGGRKHDDVDDDDDDDKSTSPESP
ELPPWQESCQPSPSGPDRLSENRQSENSPEPLSPRLSNSTERLGQNLSPLLLHASNKEEG
RTSPHLLHSTPFLRRRRRSREDLEPVCSTPISEEDPVSQRLQQRRRSQADPLRRVLLTTQ
MKNQFAALNVPKKENSQIEGPSIANSYGFKISMQNLQDAKALHEVQYLTLMGMELHARTR
RDLEPDPEFDPICALFYCLSSDAPLPDVDGTQLTGAIVVDKDHQSCDQGHRETAPLLVRS
GVSGLQVTYTADEKMLFQELITIMRRFDPDILVGYEVQMRSWGYLLQRAAALGMDLCQQL
SRVPGDSKENRFAADRDEYGADTMTEINIIGRITLNLWRVMKTEAALNNYSFENVAFHVL
HQRFPLYSPRTLSDWFDHNTHLYRWKMVDHYVSRVRGTMQLLQQNDIIGRTSELARLFGI
QFFHVLTRGSQYRVESMMLRVAKPLNYIPVTPSIQQRAQQRAPQCIPLVMEPESRFYSNS
VIVLDFQSLYPSIVIAYNYCFSTCLGHVDSLGTPDEFKFGCTSLRVPPELLYQLRNDITV
SPNGIAFVKSSVRKGVLPSMLEEILNTRIMVKQSMKNYKQDKALMKLLDARQLGLKLIAN
VTFGYAAANYSGRMPSVEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSMFVLL
KGATKEQAFKIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKEPV
FDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQVKQFVQHQCVKVLDGRASMQDLTF
AKEYRGSGSYRPGACVPALELSRRMMAYDRRLEPRVGERVPYVIVYGMPGVPLIQLVRRP
MEVLQDPGLRLNATYYITKQILPPLARMFQLIGVDVFSWYQELPRIQKASCSSAAGGEEM
GRKGTISQYFTTLHCPVCDELTQLGVCSRCRAEPQRVAVTLYQDMRQWESQQDQLLKICR
NCSGCAERHVPCVSLDCPVLYKLSRVNRQLSKAPYLRQLLEQF
NT seq
9132 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtgcgaatcgtcaccgcagacttctatctggcaagtcccattaaggacctg
gacgtgtgctattctgaattcagggagagcgacgtgaagaaagtgccagtggtgcggata
tttggagcaacaccggcaggccagaagacgtgtctccaccttcatggcgtgttcccctac
atctacgtgccatacgatgggtacggccaacaatcagagcgctacctgcggcaggtggcc
ttcagcatcgacagggcccttaacgttgccatgggaaaccccgcctccagcatccagcac
gtcttcaaggtggtgctggtctctggcatgcctttctatggctaccatgctaaggagaag
cactttatgaagatctatctgtacaatcctcagatggtcaaaagggtgtgtgagctgtta
caaagcggagcagtgatgaacaagagctaccagccccacgagggccacatcccctacctg
ctgcagctcttcatagactacaatctgtacggcatgaacatggtgaacttggcggccgtc
aagttccgcaggggcccgaataaagaagacgcaccagcggccccagacagggaaagtccc
agcagtcggcccagcatcagcccctggaagagccccatcacctccaaactcaacgacagc
accctggggggcacatttgtccgctgggaggagaacgccataccctgctctttggtcctg
gatgaggtgcagaagcagagcacctgtgagctggaggttgatgctgtggctgtggatgtt
ctcaaccgcatggagattgaaaatcagatcggcaggaaccccggcctgcaggccatctgg
gaggacgagaagcagaggaggagagagaagaaccaggcctcccagatagaaacacctgag
tcacaagatcgcgggtttgtcacttcgacagagagcgagaaaatcttcatgaggagattt
aaggagatcctgaaggagaacgagtttgacgtgacacaaagttcgtctgttgttgacggt
gaggaccaagaggatctcctgagtgcattgactctccattctgtccccctgaccgccgag
ggactgccgtgtacccccgctaacgctgtggaagtgcacaggaactcccagccagactct
gtgaggagcagtggtaaagtcccagaggaggccgttgttgacgaggaggccatcttgagt
ctcctggagaacagtcagaccttcctcccgctctcccagacgtccagccactcgccgctg
ttagacagcagccaagaccaagccatcatcgatttgctggcagggctggagaacgatggt
ttctgcaggacccccatcaggcagaactcccaatcccagtccgtccctggtgccagtaac
taccattgcaacagtgatgaggaggaggaggggcccgagctggacaaggtggaggcagag
ctcagcgtgatcatgtcccagcggtgggacagcgaggctcctgagaactcaccaatgcca
aggcccggtgtgaaagaaccagaggactgcttcagtgacgagcagcaggagtcctctgac
gaagacatggagtggagtgggaataactctctgttcgccaacctgtccatcccgcagctc
gacggggccgcagacgagagcagcgattcctctttaacagatagtggctccaggacccag
tcctctgtcatagttacagaaaagatgcttgggaaaaggaatcccttctccggggagacg
gttcacctggagccaccttcctcagctaagatcctccttgagtgcaagcaccccgagcac
agaccagttcatgtgctggacacggagcaaccaattgacaagcactttcgatccaaaagc
agccaggacagcagtagtgaatgttcaacaggtttcaagtttaataaagaaatcccctac
atcctaccagtcaaacatcccatcccgtgcaagttacccagtcaccctgaggtgtctccc
atctgcgtagacaaacaggacataagacccctgtacacctatgacaagaaaacctccaga
gctttggataagacagacctagaaggtttcccatttggtaacggaaaggtcaccaaaaat
gggaagaagtacggcagcataaagaatgtagaaacaaactgtctgtcaattctacagaac
cacaggaccttctctctttgttactccgagctgagaaactgctcagctaagacggagctg
gaactgagccagaaggacagtaaaagccccatcctgaggaacatttcctcagccccatca
cctatggtggaggatgagtttcttgatcctcagggggaagaaataggccaggacagtgag
gagggagatgttggtgaactcaaaatcaggtacgaggactatcaggaaaataagacagag
aggaccatagtggcccaacaggaagcgcactacaagttcttccccagcgtcatcctctca
aactgcctcaatcggaagaaagctgggagcaaaaagctgtctgatccctgcagcaagctc
gaacaggcccaacctcgtagatcaaggctaaaattgtataagaaaaggttaggtatgtca
ggacagaggagcaaagtaagcatagtcgaaagctctacctctgacagccaggatagcact
ggcctcacctcaactacaccagtgactgctgacacagagatgccagctttggaggataag
ccagtagaagaagctgagccaattaaagattggtcagtcaaaaaaggagggtcaatcaca
aaagaggagccagaaagtgaggagatgtctgtaaatgaacagacagaaccactttcagag
ccctctgccaacatggtttccagttcttctgaagaagctaaagagtcagtggaggatagg
ttaagcccattacatgaattgtcagctaaagtcacctgtactaaaccttcaacactgccc
ggtagtaaatactccctgagggtcaaacggaagatgatctatgacagtgaagatggagaa
tactcaggtgctactcgttctaaaaaccaagcctctgtcaaagatcggctcaaggaggct
aatgtccccagtggacaggaagtaaagggccagaaacgacgcaagaaggaacccccaatc
atcatcaagtacattatcatcaacaggttcaaaggacagaagaacatgctggtgaagatg
tccaaagtggatgtggaggagcagtcggtcttactgacgccaaacaagcttgagcagtac
aataaactagcacctcttaaggatttttggcccaaggtgccagaatccactgctgtcaag
tttcccgttactgagccaaaggccaaaaaacaccccaaaagaaaggcaaaggtcaactcc
acaaataagaaaacagtaggcaactcctccaaacctcgggtcagacagggtgaaaaggcc
aaaaggactaatggttgtcagagaggcccaatattaccctctctgccgcccccccggcca
tgttactgtgagcttgttgatgaccacgacactgagtacacagatgtcatggtagagttg
ggctacctctctgatagacccccaagcccgattaactccacacctcctcgatgttggtcc
ccgagtgaccctcttatggacactaagagttcagaacagctgataaacccactcagtgac
ccgtgtcttagttctgcttttcacacgtcacacacagtgtcttcaaccaaaggaatacgg
aataagtgtcaaactgccaaacctaagaaatccacagacactaaacacaaagtaagtaag
cctgttagtaagcctcagaaggaagaggaacccaaaaaaatgaaaccaagacaaaggaat
gaagctgctccaaagcagaagaagaaagctaaagatacagccgaaagtactgttagcact
ccttcaaccaccacaaaacctagcaagtctcgcaaaaagaagacagaggaacccaaaagc
catgacttaagtaatgagagctcccagctcctattcccagaggatgagctacctccttcc
gagagttcctcacaagacatcccaccgtttcagcagccagtcagcacagatggatccggc
cagggcagttgtcagccaacatctacatcagactctaactcagtagcccagtctgtagaa
ccaaaggctgaggactgtgagacttccatcatggaggtcaaccaaggcttttcagcaccg
gctcagatgaaacagcaaggttgccagaccactgtggtgaaagcagaggcttcacaagag
gagtgcacaactcctccagctcctctaactggtagacccttactaaaagaccgtaaagac
tcccagttagaagcaggctccccaccctcaggccctaagaacggggagatccctactctc
tctgagaccccttctggcttggctgtcctcaagcagcttctccagaagaggcagcaagga
caggcccttcctctacaagtggtcggtacagacagccactccactgccatagctcaggcc
gcagcactactggatcccactgttaaaccagctaaatccagaaaagctccctctaccact
tcacggaagcccagggccccaaaatctgccactcccaaggataaaaagcccagaatcagg
aaaggcaagacgagcagcactcagccaaatctctcagtgaagcaggagggctacttgtca
gatgactgccccatcttcctgtcagaaccaggcatggacaactgcaacttcatagaggac
agcttgtcaccagagctcccgcacaactacacctttgatataaacgccatagatcagacc
gagttctccagcccatacagcggcagtcagtttgtcctgactgataaaaatttaccagtg
aagttcctgagtgatgtcagccaagaagctgtgtctgctcaggcacttggcttagagaag
aaacctgataggctgcttgattctggggaggagcttcaaaaaggttctgactggcacaaa
gcaaggcctgccagccctgacctctttgatcgacctgagaacggcgagtctgtatcaaat
cacctcacattccttgactctgagaaaatcaagagcagagagtgggacttctctttaggc
aaaacccatacactcagccccttccaagactttcactgtgagagaaaagagctgctcttt
tccgtcttcgacccagtccaacctttgcctttaagctctgcgtcattcgtcgaacatgag
ggctccccaacaggggagcttctggacggcattgatggactgacatccaccacacccagt
agctccccacgttccataagctcactatcccaggtgagggcaagccagctgctgcgggga
gcaggaggtggagcccatgttcttaagcctctcatgtcccctccaagccgggaggagatc
ctcagcactctgctggacctggagatgtcagaggccaccttccaggagcccttctgcagc
aacccctctgatgcaccagggaaaccaatggaggttggcggccgtaagttaacagtgcgt
accaggctggctaaggagcttgcggagttcagtggtgatctgtctttggagggcctccat
ttctggaagacggccttctcagccatgacgcaccctgcagtcactattacttcatcttcc
caagcccggggagctgaggcctcagaggcaaataaagaggccgagcttgactcgtcctca
gccagtgacaagaaggtcattctcctgccctgcaagaacccacccagcagagagcgcgtg
cagctgtggctggaagccaggaaacagtacgagagtttacagaaaggactgctgaagaag
ggaagggtcggaccggatatggaggggaactcagaaagaactgagcagacagctgcttcc
agctgtcctgcagtgaaggttgagctttgcgagagactctccagcatcaggacgcaaagg
agaaagaaatgcaatctgtccttaatcatacctcccctggacaatacagtctgtaaatcc
acagagctgagtccagtttcagatgaaggcagtgtggatactgagcaggagggtggaaga
aaacatgatgatgttgatgatgatgatgatgatgataaaagcacctctccagagtcccca
gaattgcctccctggcaggagtcctgtcagcccagcccctcggggcccgaccgactcagc
gaaaacaggcaaagtgaaaactctccagaaccactgtcaccgaggctctctaactccacg
gagagattagggcagaatctcagtcccttgctcctccatgccagtaacaaggaagaagga
aggacgagtccccatctcctccacagcaccccctttttaagaaggagacggagaagcagg
gaggatctggagccagtatgcagcacgcccatatctgaggaggatccagtttcccagaga
ctccagcagaggaggagaagccaagcggaccctttgagacgagtgttactgaccacacag
atgaagaaccagtttgctgctttgaatgtgccaaagaaagaaaactctcagatcgaaggg
cccagcatagccaactcttacggcttcaagatcagcatgcaaaacctgcaggatgccaaa
gctctgcatgaggtccagtacctaacactgatgggcatggagctccatgcaaggaccagg
cgtgaccttgagcctgaccccgagtttgaccccatatgtgccttattctattgcctcagt
tctgatgctcccctgccagacgtcgatggcacccagctgacgggtgccatcgtggtggac
aaagaccatcaaagttgtgaccaaggtcacagagaaacggcgcccctgctggtcaggtca
ggcgtctctgggctgcaggtgacatacaccgctgatgagaagatgctgtttcaggagctc
atcaccatcatgaggaggtttgacccagacatcctggtgggttacgaggtgcagatgcgt
tcttggggctacctcctccagcgggctgcagcgctcggaatggacctgtgtcagcagctg
tcacgagtgccaggtgactccaaagagaaccgcttcgctgcagacagggatgagtacgga
gccgacaccatgacagagatcaacatcatcggacgcatcaccctcaacctgtggagggtg
atgaagaccgaggcggcgttgaacaactacagttttgagaacgtggccttccatgtcctc
caccagcgcttccccctgtacagcccccgcacactgtcagactggtttgaccacaacacc
cacctctacaggtggaagatggttgaccactacgtgagtcgcgtgcgcggcaccatgcag
cttttacagcagaatgacatcatcggcagaaccagcgagctggccagattatttgggatt
cagttctttcacgttctgacccgaggatcacagtaccgcgttgagtccatgatgctgcgt
gtggccaagccgctgaactacatcccagtgacccccagcatccagcagcgagctcagcag
agggcgccgcagtgcattcccctggtgatggagccggagtctcgtttctacagtaactca
gttattgttctggacttccagtcgctctacccctccattgtcatcgcgtacaactactgc
ttctccacctgcctcggacacgtggacagcctgggaacgcccgatgagtttaagttcggc
tgcacgtccctacgagttcctcccgagctcctctaccagctccgcaatgacatcaccgtg
tcacccaacggcatcgctttcgtcaagtcgtcggtgcgtaaaggggtcctgcccagcatg
ctggaggagatcctgaacacgaggatcatggtgaagcagtcgatgaaaaactacaagcag
gacaaagccctgatgaagctgctggacgcccggcagctcggactcaagctcatcgccaac
gtcaccttcggctacgccgccgccaactactctggacgcatgcccagcgtggaggtcgga
gacagcatcgtccacaaagccagagagaccctggagagagccatcaagctggtcaatgac
actaagaaatggggagcgcgcgtcgtgtacggagacaccgacagcatgtttgttttgctg
aagggagccaccaaagagcaggccttcaagatcggcaacgagatcgctgaggcggtcacc
gcaaccaaccccaaaccagtcaagctcaagtttgagaaggtgtacctgccctgcgtgctg
cagacaaagaagcgttacgtgggctacatgtacgagagccttgaccaaaaggagcccgtg
tttgacgccaaagggatcgaaacggtgcgccgcgatggctgccccgctgtttccaagatt
ctggagcgttccattaagcttctgtttgagactcgggacatcagccaggtgaagcagttt
gtgcagcatcagtgtgtaaaggttctggacggccgggccagcatgcaggacctgaccttc
gccaaggagtaccggggcagcggctcgtacagacccggagcctgcgtgcccgccctggag
ctctccaggcgtatgatggcgtatgaccgtcgcctggagccccgtgttggtgagcgcgtg
ccctacgtgatcgtgtacgggatgcccggcgtgcccctcatccagctggtgcgtcgtccc
atggaggtgctgcaggaccccgggctccgcctcaacgccacctactacatcaccaagcag
atcctgccgccgctggcccgcatgttccagctgatcggagtggacgtgttcagctggtac
caggagctccccaggatccagaaggcgtcctgctcctcagcggcaggaggagaggagatg
gggaggaagggaaccatttcccagtatttcaccacgcttcactgccccgtgtgtgacgag
ctgacccagctgggcgtgtgctcgcggtgccgcgctgagccccagagagtcgcagtcaca
ctctaccaggacatgagacagtgggagagtcagcaagaccagctgctgaagatctgtagg
aactgtagcggctgtgcagagcgccacgtgccctgcgtgtctctggactgtcccgtcctc
tacaagctgtcccgggtcaacagacagctctccaaggccccctacctccgacagttgctg
gagcagttctga
DBGET
integrated database retrieval system
