Plectropomus leopardus (leopard coralgrouper): 121955495
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Entry
121955495 CDS
T07454
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121955495 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121955495 (trim54)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121955495 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
Sina_RING
DUF5799
Ima1_N
DUF488-N3i
Zn_ribbon_FGT1_2
DUF7560
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
121955495
NCBI-ProteinID:
XP_042359418
LinkDB
All DBs
Position
16:23185560..23203984
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AA seq
365 aa
AA seq
DB search
MNFALRPPSAGSSGPGAGRGVTMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCANDI
FQSANPLWHSRGSSSMASSGARFRCPSCRQEVVLDRHGVYGLQRNLLVENIIDIYRQQES
SRLVNMKPEPQQQQLLCEEHEEEKINIYCLSCETPTCSMCKVFGKHKDCDVAPLSSVYMR
QKTDLSDSIAILVASNDHVQAVISQMEEISRTVEEYGRRQREQLADSFDSLVAILDERKR
ELVGLITKQQDDKLKRVRSLISQHSDQLETAVTLVESAIQSMEEPHMSLFIQSAEVILEK
MAVTARAANMERPELGYESMSHFVIDTDDLIDMLKNIDFCSGMRDDGEEDPEEDEESELD
FNSRY
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctctcaggcctccatcagcaggcagttctgggcctggcgctggcagagga
gtcaccatggagaacctggagaaacagctgatctgcccggtctgcctggagatgttctcc
aaacctgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaacgacatc
ttccagtcagctaaccctctgtggcattcccgcggctcctccagcatggcttccagtggc
gctcgctttcgctgtccatcgtgtcgccaggaggtggtgctggaccgccacggggtctac
ggtctgcagaggaacctgctggtggagaacatcatagacatatacagacagcaggaatcc
tccaggcttgtgaacatgaagccagagccgcagcagcagcagctgctgtgtgaagaacat
gaagaggagaagatcaatatctactgcctgtcctgtgagacgccaacctgctccatgtgc
aaagtgttcggaaaacacaaagactgtgacgtcgcaccgctcagcagcgtttacatgaga
cagaagacagacctcagcgacagcatcgcgatcttggtcgccagtaacgaccacgtccag
gccgtcatctctcagatggaagaaatctcccgcactgtagaggaatatggtcggcgacag
agggagcagctggctgacagctttgacagcctggtagccatcttggacgagcggaagcga
gagttggtggggctcatcaccaaacaacaggacgataaacttaaacgtgttcgatctctc
attagtcagcacagcgatcaactggagacggcagtgacgctggtcgagtcagccattcag
tcgatggaagagccccacatgtctttgtttatacagagcgccgaagtcatactggaaaaa
atggcagtgacagccagagccgctaacatggagcgtccagagctcggttatgagagtatg
agccacttcgtcattgatactgatgacctcattgacatgctgaagaacattgacttctgc
tctggcatgagagatgatggagaagaagaccctgaagaggatgaagagtcagaacttgac
ttcaactccagatattaa
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integrated database retrieval system
