Plectropomus leopardus (leopard coralgrouper): 121955530
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Entry
121955530 CDS
T07454
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121955530 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121955530 (cstf3)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121955530 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
TPR_16
Motif
Other DBs
NCBI-GeneID:
121955530
NCBI-ProteinID:
XP_042359505
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Position
1:complement(23387765..23401037)
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AA seq
716 aa
AA seq
DB search
MSTEGAADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPD
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAALLPETVVAPSAPSLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GKQSDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagggagccgccgaccaggcagcagcagagtatatcccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcgcc
cagttcccaagttctggcagattctggaaactattcattgaagctgagatcaaggctaaa
aactatgacaaggtagaaaagttgttccagagatgcctaatgaaagtgttgcacatcgac
ctgtggaaatgttacctctcatatgtcagagagaccaaagggaagctgcccagttacaaa
gagaagatggcccaagcatatgacttcgccctggataaaattggcatggaaataatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagtcgaggctgtcggctcgtat
gcagagaaccaacggatcactgcagtccgaagggtgtaccagagaggctgcgtgaacccc
atgatcaacatcgagcagctctggagagattacagtaaatatgaggagggaatcaatgtg
cacttggccaaaaagatgatagaggaccgaagtagagactacatgaatgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggttggacaggaacgcaccctcagtaccgccc
cagaactcccctcaggaagcacagcaagtggaaatgtggaaaaagtacatccagtgggaa
aaaagcaacccattgcgcacagaagaccagactctcatcacaaagagagtgatgtttgct
tatgagcagtgcctgctggtactgggccatcatcctgacatatggtatgaggcagcacag
tacttggagcagtccagcaaactgctggcagagaaaggggatatgaataactccaagctg
ttcagtgacgaggcagctaacatctatgaacgtgccatcgggactctcctgaagaagaac
atgctgctctacttttcattcgccgactatgaagaaagtcgcatgaaatacgagaaggtc
cacagcatctataacaaactgctggccatcgaggacattgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcggagggcatcaagtccggtcgcaccatcttcaaa
aaggccagagaagatctacgcacacgtcaccatgtgtacgtgacagcagcgctgatggag
tactactgcagcaaggataaatcggtggcctttaagatttttgagcttggtttgaagaag
tacggtgacattcccgagtacatactggcatacatcgattacctctctcaccttaatgag
gataacaacaccagggttctgtttgaacgtgtcctcacctcaggaagtctgtcaccagat
aagtcaggcgagatctgggctcgcttcctggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgattcacagccttcaaggacgaatacgagggcaaa
gaaacggccttgcttgtagatagatacaagttcatggacctgtatccctgctctgctagt
gaactcaaggccctcggttacaaggacgtgtctcgtgccaaactggcagctctgctccca
gagaccgtggtggcgccctctgcgccttcacttaaggatgaagctgaccgtaaacccgag
taccccaaacctgacactaatcagatgatccccttccagccacgtcaccttgcccctccg
ggtttacaccctgttcctggtggagttttcccagtccccccagctgctgttgtcctaatg
aagctgctccctccacctacgtgcttcacgggtccctttgttcaagtggatgagctcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggtaaacagtccgatgcaggaggggagggcaatggatccatggagaaccatgccgttgcc
aaatcactcaagaggcctaatgctgactctgatgaggaagatgacaaaggagccgtggct
ccacccatacacgacatctaccgtgcacgccaacagaagaggattcgataa
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