Plectropomus leopardus (leopard coralgrouper): 121955962
Help
Entry
121955962 CDS
T07454
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121955962 (prdm1c)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121955962 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_4
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
Zf-C2H2_ZNF451
zf-BED
zf-C2HE
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
121955962
NCBI-ProteinID:
XP_042359995
LinkDB
All DBs
Position
16:complement(15497251..15509031)
Genome browser
AA seq
784 aa
AA seq
DB search
MCGSSQGFTASSSPCTTAMLTSESSPQRTGVTVAAMPETQDTDMTSWCEEDFEEKCTYIV
KDQLLEDESENNGKTQAERSLPRNLALKRCHDSAEVRGVTSKELIPKGTRFGPLVGESYT
NETLPKDADRKYFWRVFSEGRLHHILDGLNEERSNWMRYVNPACTTDEQNLVACQSGLDI
FFYTVKPLQPGQELLVWYCPEFAQRCNYPPLCQLAIDSIEQSQEEEKTTAKRGHSVSEIL
RNEPSKSQTACSRHLDSPLSQTNLPAVFPLCPRVVYPVQPRSESIHGHKYATLPSLPSCS
PPAAKRLALSVPSSLHFTFQHSQSPVIVKPYQEPSALGRVHPALQHAPYLLPHYSLGLNG
ILPHSYPFHSDRLKPHLTSHLLPFDGYAHFLHPLANTHKDLTLALSNAKQDLILSPEHRD
NKDRASKRTNYLKIPSDDLRDFKHSPPSNVHADLTVPATSSASSMVTSLRRALPSLAPGG
CSPPVGMAAFSDCLPSKPTSANQSNNEDAVDLRKTKRGGQIIGYKTLSYPLTRQNGKIRY
ECNICGKVFGQLSNLKVHLRVHSGERPFRCQTCNKNFTQLAHLQKHYLVHTGEKPHECKV
CHKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQFVHLKLHKRLHSGERPHRCPCCPCA
YLHYCSLQVHLQGFCPLSPSASHRHSPEELHRVNAEIERFDMSEAAEQLEAMAAEAEMDQ
GNVIDLIKKMETHSSAHHDGAEGETDLSIYKSANKFSAVQLRHSSSLPLHSTGIKLESGC
ISEA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagcctcctcctcgccgtgcaccacagccatgtta
acctcagaaagctctccacaaaggacaggggtcactgtagcggcgatgccagagacacaa
gatacagacatgacatcatggtgcgaggaagactttgaggagaagtgcacttatattgtg
aaggaccaacttctggaggacgagtccgaaaacaacggcaagacacaagctgagagatcc
ttaccccgaaacctggccctgaaacgctgccatgattctgcagaggtgcgtggggtgacc
agtaaggagctgattcctaaggggacacgtttcggtcctctggttggggaaagctacacc
aacgaaacgctgccgaaagacgcagacaggaagtacttttggagggtcttctcggagggg
cgtctccaccacatcctggatggtttgaacgaggagaggagcaactggatgcgttacgtc
aacccagcctgcactacagatgagcagaacctggttgcgtgccagagcggtctagacatc
ttcttctacaccgtcaaaccacttcagcctggccaagagctcctggtgtggtactgccct
gaatttgcccagcgttgtaactaccctccactgtgccaactcgctattgacagtattgag
cagagtcaagaggaggagaagacaacagctaaacgaggacacagtgtctctgaaatcctc
cgaaatgagccctccaaatcccagactgcctgcagcagacatctggacagtcccttgtct
cagaccaacctccctgcagtttttcccttgtgtccccgcgtggtctacccagtccagccc
cgctcagaatcaattcatggtcataaatatgcaactctaccatctctgccatcctgtagc
cctccagctgccaaaaggctggctctaagtgtcccctccagtttgcacttcacctttcag
cacagtcaaagccccgttatagttaaaccttaccaagagccctctgcgctaggtcgtgtt
catcctgctctgcagcatgctccctatctgctgcctcactactcacttggccttaacggt
attctacctcattcatacccattccatagtgaccgactgaaacctcacttaacatctcat
ttgctaccttttgacggctatgcgcacttcctccaccctctggcaaacacacataaagac
ttgacacttgcactatccaacgccaaacaagacctcattctttcacctgagcacagagac
aacaaggaccgtgcatccaaaaggacaaactacctcaagatcccctcagatgacctcaga
gatttcaaacactcgcctccaagcaatgtccatgcagacctcacagtacctgccacatcc
agtgcctcatccatggtcacctcactccgcagagcactgccgtctctagcacctggagga
tgctcaccaccggtgggcatggccgctttctcagactgccttccctccaaacccacctct
gcaaatcagagcaataatgaggatgcagtggatctcaggaagaccaaacgagggggacag
attattggctacaagaccctgtcttacccccttaccaggcagaacggaaagatccggtat
gagtgcaacatctgtgggaaggtctttgggcagctttccaacctaaaggtccatctgcga
gtgcacagcggagaacgtccattcaggtgtcagacctgcaataagaacttcactcaactg
gcccacctgcagaaacactacctggttcacactggagagaagcctcatgaatgcaaggtg
tgccataagcgattcagcagcactagtaacttaaagactcaccagcggctacactcaggg
gagaggccttaccagtgcaagctctgtccagcccgcttcactcagtttgtccacctgaag
ctccacaaacgcctccacagtggagaacgacctcacagatgtccttgctgcccctgtgcc
tatctccactactgcagcctccaggtgcacctccaaggtttctgccccctctccccctcg
gcctcccacagacactcaccggaggagctacaccgagtcaacgcagagatcgagaggttt
gacatgagcgaggcagcagagcagctcgaggccatggctgcagaggccgagatggaccaa
gggaatgttattgacctcataaagaaaatggagactcatagctctgcccaccacgatggt
gcagaaggggagactgacctgagcatctacaaatcagcaaacaagttttctgcagttcag
ctgcgtcatagcagctctctacctctgcattcaaccggcatcaaactggagtcaggctgc
atatcagaggcctaa
DBGET
integrated database retrieval system
