Plectropomus leopardus (leopard coralgrouper): 121955973
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Entry
121955973 CDS
T07454
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep00100
Steroid biosynthesis
plep01100
Metabolic pathways
Module
plep_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
121955973 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
plep01006
]
121955973 (fdft1)
Enzymes [BR:
plep01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
121955973 (fdft1)
Prenyltransferases [BR:
plep01006
]
Terpene biosynthesis
Squalene/phytoene synthase
121955973 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
121955973
NCBI-ProteinID:
XP_042360006
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All DBs
Position
16:11516209..11525441
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AA seq
457 aa
AA seq
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MAGACCKCPVSLSVFKRSLSVAPRGSGSAPRSLLPGWRLGERGLQEAARPSSAFRPAGFY
RHTTFFCLSCQEAMSESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMTIPLNKKVPMLNDFHTYLYQDEWCFTESQEKDRQVLADFPTISLEFRNLAQEYRDV
ISDICHRMGVGMAEFLEKKVGSMKEWDLYCHYVAGLVGIGLSQLFSASQLEDPEVGRDTE
LANSMGLFLQKTNIIRDYLEDTQEGRAFWPQEAWSQFAGRLEDLAQPEKLDSALSCLNML
VTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSTCYNNPMVFQGVVKIRKGQAV
TLMMEATNMRAVQTIITQYSQEILQKVSLTDPSRDKTLHILAVIREKSTLSQSSLPSRTH
HLSPMYLSAAMLLAALSWQYLSTTAAQAQGTGDMQGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcatgctgcaagtgtccggtctctctgtccgtgttcaagcgctctctctcg
gtggcgccgcggggcagcgggtccgctcctcggtccctcctcccgggctggaggctcggg
gagcggggcctgcaggaggccgcccgaccctccagcgccttcagacccgcaggcttttac
cgacacacgaccttcttctgtctctcctgccaggaggccatgagtgagagtctgcggacc
tgctatctgtacctgaaccagaccagcaggagctttgcagctgtgatccaggcgctggac
ggggagttacgacatgcagtttgtattttctacctggttctgcgagcgctggatacagtg
gaggacgacatgaccatccctctgaataagaaggttcccatgctgaatgacttccacaca
tacctgtaccaggatgagtggtgcttcactgagagccaggagaaagaccgacaggttctg
gcggatttccccacgatatcactggaattcagaaacctcgctcaggaatacagagacgtc
atctcagatatctgccaccgtatgggagtgggaatggctgaattcctggaaaagaaagtg
ggatccatgaaggagtgggacctgtattgtcactacgtggcggggctggtcggtatcggt
ctgtctcagctgttctctgcgtcccagttggaggaccctgaggtggggcgagacactgaa
ctggccaactccatgggcctgttcctccagaagaccaacatcatccgagactatctggag
gacacgcaagagggacgtgccttctggccgcaagaggcttggagtcagtttgcaggtcgt
cttgaggacttggctcagcctgagaagctggactcggctctctcctgtctcaacatgctg
gtcactgacgctctgcgacacgtcccggatgttatcgcctatctgtcccgcctgcgcaac
cagagcgtcttcaatttctgtgccattccgcaggtgatggcaatagctacgctgtcgaca
tgttacaacaaccccatggtgttccagggagtggtgaagatcagaaagggacaggcagtc
acactcatgatggaagccactaacatgagagctgtgcagaccatcatcacccagtacagc
caggagattttacagaaggtctccctcacggacccgtcgcgggacaagacactgcacatc
ctggctgtaatcagagagaagtccactctgtcacagtccagcctcccctccaggacccac
cacctgtcgcccatgtacctgtctgctgctatgctgctcgccgctctcagctggcagtac
ctcagtaccactgcggcgcaggcacagggcaccggagacatgcagggacagtga
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