Plectropomus leopardus (leopard coralgrouper): 121956079
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Entry
121956079 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121956079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121956079
03036 Chromosome and associated proteins [BR:
plep03036
]
121956079
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121956079
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121956079
Chromatin remodeling factors
BAF complex
121956079
PBAF complex
121956079
GBAF(ncBAF) complex
121956079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121956079
NCBI-ProteinID:
XP_042360102
LinkDB
All DBs
Position
17:28240844..28266849
Genome browser
AA seq
1633 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHDKGMPDDPRYPQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPPGPGAGPMEGSGDPNQGMGQPNRGGPQGPGG
PGGAGGGPGGAGGPAPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQ
QPMPNMPPSTGPGGGPGAGPGPAQANYNRPHGMVGPNMAPPGPAGVPPGMQGQPTNGPPK
SWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKK
KKKKKPEAGGGAPTLGPDGEPLDETSQMSDLPVKVIHVDSGKILTGMEAPKAGQLDAWLE
MNPGYEVAPRSDSEDSSSEEEEEEEEEEEEEQPHASAAPAEEKKKIPDPDSEDVSEVDVQ
HIIEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTEKVDKQSTLLVNGQLKQYQIKGLEWL
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKW
APSVVKVSYKGSPAARRAFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHR
MKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWXLLNFLLPTIFKSCSTFEQWFNA
PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPREGQCVEYVIKCDMSA
LQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEH
LGYSGGIVSGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFK
YLRLDGTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQ
DLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGCE
RRAFLQAILEHEEQDEEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREEARNPKRKP
RLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEG
NLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEEVKKAKKRGRPPAEKLS
PNPLSLTKKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKER
IRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKDDESEGE
DSEEEEEDVDEGSESESRSVKVKIKLSRKEKGERGGKGQRRRGRGARAKPVVSDDDSEDE
QEEERSASGSEED
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggcccggaccctccccgggcccg
gggccatctccaggaggcatgatgggcccgagccccggcccctctccgggctcggcccac
agcatgatggggcccagcccgggacctcctggatccggacacccccatcctccacagggg
ccctcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcat
gacaagggaatgcccgatgacccccgctacccccagatgaagggcatgggcatgagacca
gggggccacagtgggatgggaccccctccaagcccgatggaccaacattcccaaggttac
ccctctccattgggcggctcggagcacgcacccagccccgttccagccaacggccccccc
tctggccccatgatgcctggaggtccacctggtcccggagcaggccctatggagggcagc
ggggaccccaatcagggaatgggtcagcctaaccgcgggggccctcagggtccgggtgga
cccggtggtgcaggaggtggaccaggcggtgcaggcggacccgctcccttcaaccagaac
cagctgcaccagctccgggctcagatcatggcctacaagatgctggctcgcagtcagccg
ctgccggagcacctgcagatggccgtgcaggggaagaggcccatgccggggatgcagcag
cagccgatgcccaacatgccgccttccacaggacctggaggtggacctggagctggtcct
ggaccggctcaggccaactacaacagaccgcacggtatggtcggtcccaacatggccccc
cctggacctgcaggagttcctccaggtatgcaaggccagccgaccaacggacccccgaaa
tcatggcctgaaggaccaatggtgaacgctgccgccccctctaaccctcctcagaagctg
attcctcctcagcccaccggcagaccgtctcccgctcctccctctgtcccccccgctgct
tccccagtgatgccccctcagacccagtctccgggacagcctgcccagccccctcccatg
atgcttcaccagaaacagaaccgcataaccccgatccagaagccccgcgggctggaccca
gtggagatcctccaggagagagagtacaggctacaggctcgtattgctcaccgtatccag
gaactggagaacctgcccggctctttagccggcgacctgcggaccaaagccaccatcgag
ctcaaggctctgaggctgctcaacttccagagacagctgcgtcaggaggtggtggtttgc
atgcgacgcgacacagctttggaaacggccctcaacgcgaaggcgtacaagcgcagcaaa
cgtcagtctctacgtgaagcacgcatcaccgagaagctggagaagcagcagaagatcgaa
caggagcggaaacgtcgccagaaacaccaggaatacctcaacagcatcctgcagcacgcc
aaggacttcaaggagtaccaccgctccatcacagcgaagatccagaaggccaccaaagct
gtcgccacctaccacgccaacacggagcgcgagcagaagaaggagaacgagcgcattgag
aaggagcgaatgcggaggctgatggctgaagatgaagaaggctaccgaaaactcatcgac
caaaagaaagacaagcgtctggcgtacctgctgcagcagacggacgagtacgtggccaac
ctcacggagctggtgcgcgcccacaaagccgtgcaagctctcaaagagaagaagaagaag
aagaaaaagaagaagccagaggctgggggaggcgctcctacgctgggacccgatggagag
cctttagatgagaccagtcagatgagcgacctcccggtaaaggtcatccacgtggacagc
ggaaagatcctgaccgggatggaggcgccgaaggccgggcagctggatgcctggctggaa
atgaacccgggatacgaagtggcgccgcgctcagacagcgaagacagcagctccgaagaa
gaggaggaggaggaggaggaggaggaggaggagcagccacatgcctccgcggctccagca
gaggagaagaagaagatccccgaccccgacagcgaagacgtgtctgaggtggacgtccag
cacatcatcgaacatgccaagcaggacgtcgatgacgagtacggtaacgcaagctttaac
cgcggcctgcagtcctactacgctgtggctcacgccgtcactgagaaggtggacaaacag
tcgacgctgctggtcaacgggcagctcaagcaataccagatcaaaggtttggagtggctg
gtgtcgctttacaacaacaacttgaacggcatcctggcagatgagatgggtctcgggaaa
acgatccagaccatcgccctcatcacttacctcatggagtacaagcgcctcaacgggccc
ttcctcatcatcgtacctctctcaactctatcaaactgggtctatgagtttgataagtgg
gctccgtctgtcgtcaaagtctcctacaaggggtctccggctgctcgtcgtgcattcgtt
cccatcttgcgcagcggcaagtttaacgtgctgctcaccacatacgagtacatcataaaa
gacaagcaggtgttagcaaagctccgctggaagtacatgatcgtggacgaaggtcaccgt
atgaagaaccaccactgtaagctgacgcaggtcttaaacactcactacttggcgccacgc
cgtctgctgctcacgggcacgccgctgcaaaacaaactacctgagctctggngcctgctc
aacttcctcctgcccaccatcttcaagagctgcagcacattcgagcagtggttcaacgcc
cccttcgccatgaccggagagaaggttgacctgaatgaagaagagacgatcctgatcatt
cgacgtttacacaaagtgctcaggccgttcctgctgcgccgactcaagaaagaggtcgag
gcccagctgccccgagaaggtcagtgcgtggaatatgtgatcaagtgcgacatgtcggct
ctgcagcgggttttgtacagacacatgcaggcgaagggagtcctgctcacagacgggtca
gaaaaagacaaaaagggtaaaggtggaacgaagacactgatgaacactatcatgcaactg
agaaaaatttgcaaccacccctacatgttccagcacatcgaggagtctttctccgaacat
ctcggctactctggtgggatcgtctctggccccgacctgtaccgctcctctgggaagttt
gagctgctggatcgcatcctgcccaaactgagggccaccaaccacaaagtgctgctcttc
tgtcagatgacctcactcatgaccatcatggaggattactttgcatacaggaacttcaag
tacctgcgtctggatggaaccacgaaggcagaggaccgcggcatgctgctgaagacgttc
aatgacccggcctccgagtacttcgtgttcctgctcagcaccagagccggaggtctgggc
ctcaacctgcagtctgccgacaccgtcatcatcttcgacagcgactggaacccacatcag
gacctgcaggctcaggacagagcccaccgtatcggtcagcagaacgaggtgcgcgtgctc
cgcctctgcaccgtcaacagcgtggaggagaagatcctggcggccgccaagtacaagctg
aacgtggaccagaaggtcatccaggccggcatgttcgaccagaagtcctcgggctgcgag
cggcgggccttcttgcaggccatcctggagcacgaggagcaggacgaggaggaagacgaa
gtgccggacgacgagacggtcaatcagatgatcgccagaagtgaagaggagttcgagcag
tttatgcgtatggatttggacagacgccgcgaggaggcacgcaaccccaagaggaagccc
cgtctgatggaggaggacgatatgccgagctggatcctgaaagacgacgctgaggtcgag
aggctaacctgcgaagaggaggaggagaagatgtttggcagaggatcccgccaacgcaag
gaagtggactacagcgactcgctcaccgagaaacagtggctcaaggccatcgaagaggga
aatctggaggacatcgaagaggaagtgcgccacaaaaagacgaccagaaagcgcaagaga
gaccgtgaccacgacggcgggccggccacgcccagctccagcagcggccgggggcgggac
aaagacgaggaggtgaagaaggcgaagaaacgcggtcgcccgcctgctgagaagctgtcc
ccgaacccgctgtccctcaccaagaagatgaagaagatcgtcgatgccgtcatcaaatac
aaggacggtaacggacgacagctgagtgaagtcttcatccagctgccgtctcgcaaagag
ctgcccgaatactacgagctcatccgaaagccagtggacttcagaaagatcaaggagcgg
atccgcagccataagtaccgcagcctgaacgacctggagaaggacgtgatgctgctgtgt
caaaatgcccaaactttcaacctggaggggtctctgatctacgaggactccatcgtgctg
cagtctgtcttcaccagcgtgagacagaagattgagaaggacgacgagagcgaaggagag
gacagcgaggaagaggaggaggacgtagacgaaggctctgagtccgaatctcgttcggtg
aaggtgaagatcaaactgagccggaaagagaaaggagagcgaggaggaaaaggtcaacga
cggcgcggccgcggcgcccgcgctaaacctgtggtgagcgacgatgacagcgaggacgaa
caggaagaggagcgctcggccagtggcagcgaggaggactga
DBGET
integrated database retrieval system
