Plectropomus leopardus (leopard coralgrouper): 121956314
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Entry
121956314 CDS
T07454
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121956314 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
plep04031
]
121956314 (rab40c)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121956314 (rab40c)
GTP-binding proteins [BR:
plep04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
121956314 (rab40c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121956314
NCBI-ProteinID:
XP_042360391
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Position
17:complement(5758532..5784816)
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AA seq
279 aa
AA seq
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MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPSGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccagtgaaaagctatgactacctgctcaagttcctcctagtt
ggtgacagcgatgtgggaaaaggagagatcctagacagcctgcaggatggatcagccgag
tctccatatgcctacagtagtggcatcgactacaaaaccaccaccattcttctggacggg
aggagagtgaagctggagctctgggacacatcaggacaggggaggttttgcaccatcttt
cgctcatattcccgtggggcgcaggggatccttctggtgtatgacattaccaaccgctgg
tcctttgatggaatcgacaggtggatcagagagattgatgagcatgctccaggcgtgcct
cgaatcctcgtcggtaaccgtctacatctggctttcaaaaggcaagttccaacggagcag
gcgagggcgtacgctgagaagaatggcatgacctttttcgaagtgagccctctgtgcaac
ttcaacgtcattgagtctttcacggagctgtcgcgcatcgtcctgatgaggcatggcatg
gagaagttctggaagcccaacagagtgttcagcctccaggacctctgctgcagagccatt
gtttcgtgcacgccggtccacctcatcgataagctccctcttcccgtcgccatcaagtcc
cacctcaagtcgttctccatggccaacggcatgaacgccgtcatgatgcacggacgctca
tactcgctggccaacccgtccggcggctccaagggcaacagcttgaagcgatccaagtcc
atccgtccaccgcagagcccgccgcagaactgcacccgcaacaactgtaaaatctcctaa
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