Plectropomus leopardus (leopard coralgrouper): 121956318
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Entry
121956318 CDS
T07454
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04080
Neuroactive ligand-receptor interaction
plep04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121956318
04081 Hormone signaling
121956318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121956318
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121956318
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121956318
Nuclear receptors [BR:
plep03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
121956318
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121956318
NCBI-ProteinID:
XP_042360394
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Position
17:30217772..30246766
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AA seq
416 aa
AA seq
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MEPMSNKQDSNSSEGDEKGWPDVPKRKSKNSQCSVKSVSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYEGCCIIDKITRNQCQLCRFKK
CIAVGMAMDLVLDDSKRVAKRRLIEENRQKRKREEMVKTLQTRPEPNTAEWELIRMATEA
HRHTNAQGSAWKQKRKFLSDDIGQGPMVSTSDGDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALMQVVLLMSSDRPGLTSVDKIEQCQEAYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFADQDV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgtccaacaagcaggatagcaactcatcagagggagacgagaaagggtgg
ccggatgtgccgaagagaaagagcaagaacagccagtgttcggtgaagagcgtgtctgct
cttagtgtctctgttccagggtacatccccagctacctggagaaggatgagccgtgcgtg
gtgtgtggggacaaggcgacgggctaccactaccgctgcatcacctgcgagggttgcaag
ggtttcttccgcagaacgatccagaagaacctccatccagcgtactcctgtaaatacgag
ggctgctgcatcatcgataagatcacgcggaatcagtgccagctgtgccgctttaagaag
tgcatcgctgtgggcatggccatggacctggtgttggatgattcgaagcgcgtggccaag
cggcgtctgatcgaggagaatcgacagaagaggaagagggaggagatggtgaagacgctg
cagacgaggccggagccaaacacggcggagtgggagctgatcaggatggcgaccgaagcc
caccggcacaccaacgcccagggctctgcctggaaacagaaacgcaagttcctgtcggat
gatatcggtcagggtccgatggtgtccacgtcagacggagataaggtcgacctggaagcc
ttcagcgagttcacaaagatcatgactccggccatcacgcgcgtcgtcgacttcgccaag
aagctgcccatgttctccgagctgccctgtgaagaccagatcatcttgctgaaaggctgc
tgcatggagatcatgtcgctgcgcgccgccgtgcgctacgacccggacagcgagacgctg
acgctgaacggcgagatggccgtgaaacgtgagcagctgaagaacggcgggttgggcgtg
gtgtcggacgccatctttgatttgggtaagagcctggctcagttcaacctggacgactcg
gaggtggcgctgatgcaggtcgtgctgctcatgagctcagaccgtccggggctgaccagc
gtggacaagatcgagcagtgccaagaggcctacctgctggccttcgagcactacatcaac
caccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacggacctg
cgcatgatcggagcgtgccacgccagccgcttcctccatatgaaggtggagtgtcccaac
gaactcttccccccgctcttcctggaggtcttcgcggaccaggacgtgtga
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