Plectropomus leopardus (leopard coralgrouper): 121956324
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Entry
121956324 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04120
Ubiquitin mediated proteolysis
plep04137
Mitophagy - animal
plep04144
Endocytosis
plep04340
Hedgehog signaling pathway
plep04350
TGF-beta signaling pathway
plep04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121956324
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121956324
04350 TGF-beta signaling pathway
121956324
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121956324
04137 Mitophagy - animal
121956324
09144 Cellular community - eukaryotes
04520 Adherens junction
121956324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121956324
04121 Ubiquitin system [BR:
plep04121
]
121956324
03029 Mitochondrial biogenesis [BR:
plep03029
]
121956324
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121956324
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121956324
Autophagy
Mitophagy
Other mitophagy associated proteins
121956324
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
HECT type E3
121956324
Mitochondrial biogenesis [BR:
plep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121956324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
121956324
NCBI-ProteinID:
XP_042360404
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All DBs
Position
17:28904817..29005814
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AA seq
877 aa
AA seq
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MSNSPITDICDIPLQRTDMSNSPPKRKDMSDMSNSPLQRADMSNTPPKRKDMSDSPLLVL
SSPVSSNQQPPEVDPHRPEDPQFNSRLSERRTRSEAELPPGDVKTNTAPRSRRNGPVKLR
LTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPKWNQHYDLYIGKSDSI
TISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKLSPNDSDTVRGQIVVS
LQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEY
SSPGRPLSCIVDENTPISTNGATPTTALPPIDGDQRAQERRVRSQRHRNYMSRTHLHTPP
DLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLPPGWEIRNTATG
RVYFVDHNNRTTQFTDPRLSANLHLVLNPSPSPNGSRGGIESQNVSRQNQLKDQAQQALV
SPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVM
KMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINP
DSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHN
SLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQDTKKEYVRLYVNWRFL
RGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWKSNTRLKHCTPDSN
IVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLP
KAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacagccccatcacggacatatgtgacatcccgctccagcgcacggacatgtcc
aacagcccacctaagcgcaaagacatgtctgacatgtccaacagtcctctccagcgcgcg
gacatgtcaaacaccccacctaagcgcaaagacatgtctgacagcccgctactcgtgctg
tcgtcaccggtcagctccaaccagcagccccctgaagtggatccacaccgaccggaggat
ccacagttcaactcccgactctcggagaggaggactcggtccgaggcagagctgccgccg
ggggatgtgaagacaaacaccgcgccaaggagtcggaggaatggccccgtgaagctgcga
ttaacagtcctctgcgccaaaaacctggtgaagaaggacttcttccgcctccctgatccc
ttcgccaaggttgttgtggacggttcagggcaatgccactccacagacactgtgaggaac
acgctcgacccaaagtggaaccaacactatgacctatacatcggaaagtcagattcaatc
accatcagcgtgtggaatcacaagaagattcacaagaagcaaggggccgggtttctgggc
tgtgtccgccttctgtccaacgccatcaaccgccttaaagacacaggctaccagagacta
gacctgaacaagctgagtcccaacgacagcgacacagtcagaggacagatagtcgtgagc
ctgcagtccagggaccggatcggcacaggaggccccgtggtggactgcagtcggctgttt
gacaacgatctcccagatggctgggaggagaggaggacggcgtctggacggatccagtac
ttaaaccacatcacacgcaccacacagtgggagaggcctaccaggcctgcgtcagagtac
tccagccccggacggcctctcagctgcatcgtggacgagaacacgcccatcagcacgaac
ggggccacgcccaccacggcattgccgcccatcgacggcgaccagcgcgcccaggagaga
cgggtccgctcccagaggcaccgcaactacatgagcagaacccacctgcacacacctcca
gacctccctgagggatatgagcagaggaccacgcagcagggccaggtgtacttcctccac
actcagacaggtgtcagcacgtggcacgaccccagagtacccagagatctgagtaatgtg
aactgtgaggagctgggtcctctgccgcctggatgggagattcgtaacactgccacgggg
agggtttactttgtcgaccacaacaaccgaaccactcaattcacagacccgcgcctctcc
gccaacctgcatctcgtcctaaatccgagcccgagcccgaacggttcccgaggaggcatc
gaaagtcagaatgtcagtcgtcagaaccagttgaaggatcaggcccagcaggctctggtg
tcccccggtcagctccccgaggaggccgagtgcctcacggtgcccaagtacaagagagac
cttgttcagaagctcaagatcctccgccaggagctgtcccagcagcagcctcaggccggc
cactgtcgcatcgaggtgtcccgcgaggagatcttcgaggagtcgtatcgccaggtgatg
aagatgaggccgaaggacctgtggaagaggttaatggtgaagttcagaggagaggagggg
ctcgactacggaggagttgccagggagtggctctatctgctgtcgcatgagatgctgaac
ccgtactacggcctgttccagtactcccgggacgacatctacacgctgcagataaacccg
gactctgccgtcaaccctgaacacttgtcttactttcactttgtgggccggatcatgggg
atggcggtgttccacggccactacatcgacggcggcttcactctgcccttctacaaacag
ctgctggggaaacccatcacgctggacgacatggagtccgtcgaccccgacctgcacaac
agcctcgtgtggatcctggacaacgacatcacaggtgtgctggaccacaccttctgcgtc
gaacacaacgcctacggggagatcatccagcacgaactcaagcccaacgggaagagcatc
cccgtcacgcaggacaccaagaaggagtacgtccgcctctacgtcaactggcgtttcctg
cgaggcatcgaggctcagttcctcgctctgcagaaaggcttcaacgaggtcatcccccaa
cacctgctcaaggctttcgacgagaaggagctcgagctgattgtttgcggtttgggtaaa
atcgacatcaacgactggaagtccaacacgcggctcaaacactgcacaccagacagcaac
atcgtgaagtggttctggaaagccgtggagtcgtttgacgaggagcgccgagcgcggctg
ctgcagttcgtcaccggctcctccagagttcccctgcaaggattcaaggctctccaaggt
gcagctggaccgcggctcttcaccatccaccagatcgacgccagcaccaacaacctgccc
aaagcccacacctgtttcaaccggattgacattcctccttacgagcactacgacaaactg
tacgacaagctgctcaccgccatcgaggagacgtgcggcttcgctgtagagtga
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