Plectropomus leopardus (leopard coralgrouper): 121956346
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Entry
121956346 CDS
T07454
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121956346 (casc3)
03015 mRNA surveillance pathway
121956346 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121956346 (casc3)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121956346 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121956346
NCBI-ProteinID:
XP_042360442
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All DBs
Position
17:complement(4719273..4732650)
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AA seq
804 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATTKGRVRDPEPPEVTAARPEAKSESE
CESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEAEQYSDEEAPAASEPKPSAADSPAKI
EEAVEDEEDEEKEAEGEGGGQSKEESKAEEKGNLAGERQSGDGQESTDDPETKVGGKPGQ
KLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEEQA
PKSREELIAIYGYDIRNGGGSGDRPYRQRRPRQNTSPSRDKRWRDGGGERPVRSWHSGGG
GGPNRGGTPPSSNHPSSTSPSALPLSSTQRSSNPSRPPPSRSRPSHQNQMHHPPQSQYRN
NESNAPQMHPRERQGPKAQLDPAGDRGGVGRGGRGGGCGGGGGGGGRGPSVVIEDITVIQ
GGVREQDLSVVTTAASSQPGNYQSASPRRQQQQQQQQQQQQQEQRGSTDRSAPASVVSSS
ASDPSLQSSATNREASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNASSP
GSVGGKSWAGAGDGPTQAGGSGGGGGGGGGGGGGGGGGITELDQDVARLSLVGQSWSQSP
SSYMRSEMRGLPNTMHIPGGPPQFSSMEDMGVGSNRAKRYSSQRQRAVPEPAPPMHLGVM
EGHYYEPMSYQGPIYAHGDGPAPIPPQGMLVQPEMHIPHPGLHPHQSGGPIANPALYGGP
AVSLSPGQPQQLLPPPFYPPPGVMTFPYPTMYPSPQGQAQVTYGGVTYYDTMQQQAQPKP
SPPRRTSQPVTVKPPPPEVHFASE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtccccggcgaccaccaagggccgagtg
agggaccccgagccgccggaggtgacagcggcccggcccgaggcgaagagcgagtccgag
tgtgagagtgaagatggtgtaggagaagctgtcctctctgactacgacagcgctgatcca
gaggaaaacggctcccattcagagggagttgaggaagaggaggcagaacagtacagcgat
gaagaagctccagcagccagtgagcccaaaccctctgcagcagacagcccagcaaagata
gaggaggcggtggaggacgaggaggatgaagagaaggaagcagagggggagggaggagga
cagagtaaagaggagagcaaggccgaggagaaagggaacctagccggagagagacagagc
ggggacggacaggagtctacagacgaccctgagacgaaggtgggaggaaaacccggtcag
aagctcgacgatgatgaagacagaaagaacccggcctacatcccgaggaagggtctgttc
tttgagcatgacgtcagaggacatgctcaggaagaggagagacctaaaggacgaaacagg
aagctgtggaaggacgagggtcgctgggaacacgacaagttcagggaggaggagcaggcg
cccaagagccgcgaggagctcatcgccatctatggctacgacatcagaaacggcggtggc
tctggagatcgaccgtaccggcagcgcaggccgagacaaaatacgtctccaagccgagac
aaacgttggagagatggaggaggagagcgaccggtccgatcctggcacagtggcggagga
ggaggtccgaacagaggaggaaccccaccttcatccaaccacccctcatctacatccccc
tccgctctcccactgtcctccactcagcgcagcagcaatccctccagaccgcctccctct
cgcagcagaccatcccaccagaaccagatgcaccacccgcctcagtcccagtacaggaat
aatgaatcaaacgcacctcagatgcaccccagagaacgacagggccctaaggctcagctt
gaccccgcaggagacaggggtggggtcggcaggggtggacgtggtggtggttgtggtggt
ggtggtggtggtgggggaaggggaccctcagtggtcattgaggatattacagtcatccaa
ggaggtgttagggaacaggacctaagtgtcgtaacgacggcggcatcatcacagccaggc
aattaccagtctgcctcgccgagacgacagcagcagcagcagcagcagcagcagcagcag
cagcaggaacagcgagggagcacagacagatctgcgcccgcatctgttgtttcctcatcc
gcctctgacccctccctacagtcatcagcgaccaatcgggaagcctctcctcccaccgag
cggccggtggagcgtaaatcgtactctctggctcgcaggactcgctctcggcccgctgac
ctgggcagcaaacagccgtccatggaggagtcagcagccggagggaacgcctcctcccca
ggcagtgtagggggtaagagctgggcgggagcaggcgatgggccgactcaggcaggtggc
agcggtggaggaggcggaggaggcggaggaggaggaggaggaggaggaggaggaatcaca
gagctggaccaggacgtggctcgactcagtctggtaggacagagctggagtcagagcccg
tcatcctacatgcggtctgagatgagaggactcccgaacaccatgcacatccccggcggc
ccgccccagttctccagcatggaggacatgggcgtcggctccaatcgggccaaacgctac
tcgtcccaacgtcaaagagctgtacccgagcctgcaccgcccatgcacctgggagtgatg
gagggacactactacgaacccatgtcgtaccagggaccaatctatgcccacggggacgga
cccgcccccatcccgccacaaggcatgctggtccagcctgagatgcacatcccacatcct
ggtctccatccccaccaatcaggcggcccgatcgcaaaccccgccctctatggaggtcca
gctgtttctctgtcgccggggcaaccacagcagctgctgccgccgcctttctaccctccg
ccaggcgtcatgacctttccttaccccaccatgtacccaagtccacagggtcaggcccag
gtgacctacggaggtgtgacatattacgacacaatgcagcagcaagctcagcccaagcct
tcacctccccgccgcacatcccagcccgttactgtcaagcccccccctccggaggtgcac
tttgcgtcagagtga
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