Plectropomus leopardus (leopard coralgrouper): 121956443
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Entry
121956443 CDS
T07454
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121956443 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plep03037
]
121956443 (ush1ga)
Cilium and associated proteins [BR:
plep03037
]
Primary cilia and associated proteins
USH complex and associated proteins
121956443 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_7
SAM_2
RGCC
Motif
Other DBs
NCBI-GeneID:
121956443
NCBI-ProteinID:
XP_042360587
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All DBs
Position
17:16681578..16691950
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AA seq
472 aa
AA seq
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MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVGRGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDAI
ATKQTGLNTKLVTKMKDRAFRDAERRIKECLKMQKKHHKRMERRFQKETSEASASDVMSF
SSYTSSSVSHKLHNFNAATVSVPYSQATLHATNRGKTKIQRKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGRRNVRDMFPRDNFDAISRAISEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDLGGRDEGSVDRSGNNVRLRSRLQQ
YPSADEDSIGSARSLQERNIEELPWDEVELGLDDDDEADTSPLEVFLATQSMSDFFSIFK
REKIDLEALLLCSDHDLKSIHIPLGPRKKILDACKRRLETIEDPDCIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcagcccgggacggctacctggacttattgaaggaggcg
actcggaaggacctgaacgcgcctgatgaggatggaatgacgccgacgctatgggctgct
tatcacggcaacctggaggctctacggctgattgtggggaggggaggaaaccctgacaag
tgtgacatatgggggaacacgccgctccacctggcagctgccaatggtcacctcaattgc
cttttcttcctggtgtctttcggtgccaacatatggtgcctggacaacgactaccacacg
ccgttggacatggccgctacaaaaaatcacatggattgcgtccgctacctggatgccatc
gctacaaagcagacaggcctcaacacaaagctggtcacaaagatgaaggatcgggcattt
cgtgacgctgagcggcgaatcaaagagtgcttaaagatgcagaagaaacatcacaaacgc
atggagcggaggtttcaaaaggagacttctgaggcgtctgcgtcagatgtcatgagcttt
tccagttacaccagcagctctgttagccacaagctgcacaacttcaatgcagccactgtc
agtgtgccatattctcaggctactctccatgccacaaaccgagggaagaccaagatccag
aggaaactggagaagaggaaacaaggagatgggacctttaaaatctacgaggacgggaga
aagagtgttcgctccctctctggacttcagctgggtaatgatgtcatgtttgtcaaacaa
gggacgtacgtcaacccaaaggatcgtggccgccgcaacgtccgtgacatgttccccaga
gacaatttcgatgccatttcacgtgccataagcgagccggacctccacgggcccgatgtg
gactactctgagatcagcactgactcaggacatgactccctgttcaacaggcctggtctt
gggaccatggtcttcaggaggaactatgtgagtggggggatgtttgaccttggtggtcgg
gatgagggcagtgtggacaggtcgggtaataatgtgcgtttacgcagtcggctgcagcag
tacccgagtgcagacgaagacagcatcggcagtgcacgcagtttgcaggagaggaacatt
gaggagctgccctgggatgaagtcgaattagggctggacgatgatgatgaggcagacaca
agccctctggaggtcttccttgctacgcagagcatgagtgactttttttccatcttcaaa
agggagaagattgaccttgaagctctgttgctgtgctctgaccatgaccttaagagtatc
cacatccccttaggaccgaggaaaaagatcttagatgcttgtaagagacgactagagacc
atagaggacccagactgcatcgaggacacagagctgtga
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integrated database retrieval system
