Plectropomus leopardus (leopard coralgrouper): 121956645
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Entry
121956645 CDS
T07454
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plep01001
]
121956645 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plep04054
]
121956645 (ciita)
Enzymes [BR:
plep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121956645 (ciita)
Protein kinases [BR:
plep01001
]
Serine/threonine kinases: Other
TAF1 family
121956645 (ciita)
Pattern recognition receptors [BR:
plep04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
121956645 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
LRR_8
AAA_16
nSTAND3
AAA_22
Rx_N
DUF815
Motif
Other DBs
NCBI-GeneID:
121956645
NCBI-ProteinID:
XP_042360912
LinkDB
All DBs
Position
17:24348025..24373186
Genome browser
AA seq
1647 aa
AA seq
DB search
MAQFEEVLDGVRLALTWASPAEIRALLENLVEEQIISEAYGESLSRHRLTAACKPGSVVT
GLTTYGHLNQDQVSQVRKSSKTREADYNQIRSQFVSSADEHESSKSWPEHHKNNLKLSQE
LRGGPAMDSLNLFSAPVVLDFHCSLSLDDETTDLLRSADLMQKPVSDSERMNEGNLEDVK
EWLEQVEEAARRIAVPLWQHWDRGQRMLLPLVHAGMTPAGGTTSEITVRKGEAECPVSNM
EEETELAMACRTLDMYADTFKWTEMDITDPGFTLNADGAAKGLCCSNFDSVTTTGSNHLN
IAGARMNASPVEADPATDTNLTDRLEGDLDACWGADRTTDDLFQLMREVQFGTDAGFASH
IAHLFSPCAPTDTQTDAQDHFFNSSTDHSMTLDSAENVFKAAYSAKVCTDDITGFPKSTE
DEERVDSQGGAKMQEVEQDPLLSSYLGDLPDDLEDYLNDDFLGKYLDKGVLFDEPLFSCE
IEELSTCCELPMPIELPGPDSQQQTPEDNLTTKTNNRRKRSRASRSQQCTDEDTPSRPKR
QRAAGRTKTKEVQAEPTVTQDIDTATEPSSAEMVVVPTTPPKILHLHPSIQFITIPDTPA
YQVVQTVRLPPSVIGLPLPNTAATPTYILVPATSPPFNRQMPPLSPIDGAVAPVQMSSSP
LGSQSETANKAMSPTCDSPLSPSNEMSTCKESPLPQSPTALDIPQVVKDYIQGAKVHISQ
TCQDMEAGLSLTSHYVDVPMSQREMCSGKSTNKVLDKELIIMGDTDRQKSLLGRSQIFEG
QNGDKPKRYILLLGSAGMGKTSLIRKLLLDWSKDCFPQFDFVFLLDRKSLSLTEAAFSLQ
TLLLNLSSFTPSCMDPEAVYTQILAAPKRVLIIFDGFGELRDYEILLQTQEKDLIASLQK
DSRAQNFTVRQLYSAILQRVVLPGCTLLLSTQPRGTATQLLRRTDSLLEVCGFTPTDVEV
YLSQYFTDPDLRASALDCLKKCNYLHLLCWNPGLCRLVCYVLEQCKTLEVLPRTLTGLCH
QVLRLKMEDSRSRHSQAENQSETPVQSVEETQTSSSQVKRHHRSTRTNSRAQVRPHSQRA
RRAKTQNQEENDSDGEEMKSAGVDRKEERELLSQLSSLAWESVKANSSILPTGRTISDKL
KAFGHRTGLFSSHHVRMRQVVSSGETEGGGREQTVTRENGAQRGSKGMDTEHAAAGDDHI
LLWANPFLQSYLAGVHLSLSRTVTDRAFFPTLPFQSSQRGRRRPQREELELTQRFAVGLL
FSNRAELQRLHSYTETIFRDMVAAKQALVTKHLEGLSYSDLSPAQVLEACHYVYELSSTC
GDGSRDTNSARLVTHLAVNLPEVLTFHGVPLKPSDVFAVQKVLERGGTEGRRFCLDLEDS
GIQISGLRALVGLNNINTYRACIADVITLWEQLEQSGEEELLQGTVSKFTIHPLKATQVF
HIEHLAKLVNIHVHKRLSDSSSQSDSILAEGIPAVRELHKLEFELGPEKGPLALPQLWEL
LPGLQNLQHLDLENCKIGDKGAEKLADALVSLSSLEILNLSQNCIGDQGVKKLAATLRDL
PKLHCLSLYSNVISDEGAESLAAALPHVASLTDLDVKYNKLTDVGAQTLAASLRNCKKMK
TLRMWNQCIPYGVFERLQQQDNRILWQ
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcgaggaggttctggacggagtgcgactggctctgacttgggcctctcct
gctgagatccgagctctgctggaaaatttggtggaggagcagatcatctcggaggcctac
ggcgagagcttgagtcggcaccgacttactgcagcatgtaaaccgggatctgttgtgaca
ggattgaccacttacgggcacctcaaccaagatcaagtcagccaggtgaggaaatcatca
aagactagagaggccgactataaccagattagatctcagtttgtgtcatcagcggatgaa
catgagagctcaaagtcctggccagaacatcacaaaaataatctgaaactaagtcaagaa
ttgagggggggaccagcgatggactccttgaatctcttctctgccccagtggtacttgac
tttcactgcagtcttagtttagatgatgaaacaacagatttgctgagaagtgcagattta
atgcagaagccagttagtgatagtgaaagaatgaatgaggggaatttggaggatgtgaag
gagtggttagagcaggtagaggaggcggctagaaggatagctgtccctttgtggcagcac
tgggacagaggacagaggatgttgctgcctctggttcatgctggcatgactcctgctggc
ggtacaacaagtgaaattacagtgagaaaaggtgaagcagaatgccctgtttcaaatatg
gaagaggaaacagagcttgcaatggcttgcaggactttagatatgtacgccgacaccttc
aagtggacagaaatggacattacagacccgggcttcacactgaatgctgatggagcagca
aaaggcctctgctgctccaattttgacagtgtgacaacaactggatcaaatcatttgaat
atcgctggagcaagaatgaatgcctcacctgttgaagccgatccagcaacagacacaaac
ttgacagacaggctagagggcgatctggatgcctgctggggagctgacaggacaacagac
gacctgtttcagttgatgagagaagtacagtttggcacagatgcaggatttgcatcacat
attgcacatttgttttctccctgtgcaccaactgatactcaaactgatgcacaagatcac
ttttttaactccagcacagatcacagcatgacattagacagtgcagaaaatgttttcaag
gctgcttatagtgcaaaagtatgcactgatgacataacaggcttcccaaagagtacagag
gacgaggaaagggtcgattcacaagggggtgccaagatgcaggaggtggagcaggacccg
cttttgagttcttatttgggagatctaccagatgatttagaggactacctcaatgatgat
ttcctagggaagtatcttgacaaaggtgtgctctttgacgaaccgttgttcagttgtgag
atagaagaactcagtacctgctgtgagcttcccatgccgattgagctgcctggcccagac
agccagcagcagacaccagaggacaacctaacaaccaaaacaaataacaggagaaaaaga
tccagagcttcccgatcacaacagtgcactgatgaggacacaccatcgaggccgaaaaga
caaagagcagcaggtcgaacaaaaaccaaagaggtacaggctgagccaactgtcacccaa
gacattgacacagcaacagaaccgagttcagcagagatggttgtcgtcccaaccactcca
ccaaaaatccttcatctccatccctccattcaattcatcaccatcccagacactccagca
tatcaggttgtccagacagtgaggctccctccctcggtcattggacttccactccccaat
acagctgccacacctacttacatattagttcctgctacatcgccacccttcaaccgccaa
atgccacctctctctccaattgacggtgcagtagcaccagtccagatgagttcatcccca
ttaggatctcagtcagaaactgctaacaaagccatgtctcccacttgtgactcacccttg
tccccaagcaatgagatgtctacatgtaaggaatcacctcttcctcagtctcccactgcc
ctcgatattccccaagttgtaaaggactacatccagggagccaaagtccacattagtcaa
acctgccaggatatggaggcaggccttagcctgacctctcattatgtggatgtgccaatg
agccagagagagatgtgctctggaaaaagcacaaacaaagtcctggacaaggagctaatc
atcatgggagacacagatcggcagaagagcttgttgggacgtagtcagatattcgaaggc
caaaatggggacaaacccaaacgctacatattgttactcggcagtgctgggatgggaaaa
accagcctgatcaggaagctgttacttgactggtccaaagactgcttcccacagtttgac
tttgtcttcctcttagacagaaaatccctgtctttaacagaggcagcctttagccttcag
acccttctattaaacctctcctccttcactccttcctgcatggaccctgaggcagtgtac
actcaaatccttgcagcccctaaacgcgtgcttatcatttttgatggctttggtgagttg
cgggactatgaaattcttctccagactcaggaaaaagacttgatagcatcattgcagaaa
gacagtagagcacagaacttcacagtaagacagttatactctgccatccttcagagggtg
gtccttccaggctgcactcttcttctttcgactcaaccaagaggcactgccacccagcta
cttcggcggacggacagcctcttggaggtgtgtggcttcacccccacagatgtagaggtg
tatttgtcccagtacttcactgatcctgacctcagagcttctgcattggactgcttaaaa
aaatgcaactatctacatctcctctgctggaaccctggactgtgtcggttggtctgctat
gttttagaacagtgcaaaactttggaggtcctaccgagaactttgaccgggctttgtcat
caagtacttcgtctgaaaatggaagacagtaggagcaggcactcacaggctgaaaatcaa
tcagaaacacctgtgcagtcagtagaagaaacccagaccagcagttctcaagtgaagagg
catcacagaagcactcgaacaaactccagagcacaggttcgccctcactcacaacgagca
aggagggcaaaaacacaaaaccaagaggagaacgacagtgatggagaggagatgaagagt
gctggcgtagacagaaaagaggagagagagttgctgtcccagttgagttctttggcctgg
gagtcggtcaaagcaaactcctccatcctcccaacaggacggacaatatctgacaaactc
aaggcgttcggccacaggacagggctcttctcttctcaccacgtgaggatgaggcaggtc
gtctcaagtggtgagacagagggaggaggaagagaacaaacggtaacaagggagaatggt
gcacagaggggaagcaaagggatggacactgaacatgctgctgctggtgatgaccacatc
ctgttgtgggccaacccattcctccagagttacctggcaggagtccatttgtctctgtca
aggactgtaacagaccgtgccttcttcccgacactccctttccagtcaagccagagggga
cgcaggcgaccccaaagggaggagctcgagctcactcagcgatttgcagttgggctcctg
ttcagcaacagagcagagctccagaggcttcactcatacacagagacaatctttagagat
atggtggctgccaagcaggctttagtaacaaagcaccttgagggtctttcctacagtgac
ctgagccccgcgcaggtcctagaggcttgtcattatgtttatgagttgagttccacatgt
ggtgatggcagcagagacactaacagcgcacgattagtcactcacctggcagtgaatctt
ccagaagtcctgacgtttcatggagtgccactcaagccatcggatgtgtttgctgtccag
aaagttctcgaaagggggggaactgaaggtagaagattctgtttggatctggaggattct
gggatacagatttcgggactcagagctcttgttgggctcaacaacatcaacacatacagg
gcatgcattgctgatgtcatcaccttatgggagcagttagagcagagtggtgaagaggag
ctcctacaagggacagtgtccaaattcacaatccaccctctgaaagccacacaggtgttt
cacatagagcacctggcaaagctggtgaatatacatgtgcacaagaggctgtctgacagt
tccagccagtcagattcgatcctggccgagggaataccagccgtcagagagctacacaag
ctggagtttgaacttggtccagagaaaggtcccctggctcttccacagctgtgggagctc
ctgccaggtctacaaaatctacagcacttagatctagagaactgtaagatcggggacaaa
ggagcagagaaactggctgatgctttggtctcactcagttccctggagatactcaatctg
tcacagaactgtatcggagaccagggggtgaagaaactggcagccacgctcagggatctg
cccaaactgcactgtttaagtctctacagtaacgtgatttctgatgaaggagcagagagt
ttagcagctgccctcccacatgtggcttcgctcactgacctggatgtgaagtacaacaag
ctaacagatgttggagcacagaccctggcagccagtctgagaaactgtaaaaaaatgaaa
actctgaggatgtggaaccagtgtattccttatggagtgtttgagaggcttcagcagcag
gacaaccggatcctttggcagtag
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integrated database retrieval system
