Plectropomus leopardus (leopard coralgrouper): 121956937
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Entry
121956937 CDS
T07454
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04514
Cell adhesion molecule (CAM) interaction
plep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121956937 (lrrc4ba)
04517 IgSF CAM signaling
121956937 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plep04515
]
121956937 (lrrc4ba)
Cell adhesion molecules [BR:
plep04515
]
Immunoglobulin superfamily
NGL family
121956937 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
121956937
NCBI-ProteinID:
XP_042361314
LinkDB
All DBs
Position
17:complement(8457902..8491354)
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AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGEEESALVAINETFIRVHPGP
TPSGHLWPDGVSTTASSLSAGWSSSTPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTVT
QSGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKSHHFNNNMMGLGMGTGTGVVLNN
NNNPSPCSQSQNTSISCSQVPTSGGTPTGGTLPSPVPLPQMGLHSSLKGLMGKNQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagttggtgggagccgcctcctcctgc
ccctccctctgcacctgctccaaccaggcaagccgagtcatctgcaccaggcaaaacctg
gaggaggtgcccgaaagcatatcagtcaacacacgatacctcaacctgcaggagaactcg
atacaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagtcggagcattcaatggcctccccaacctcaac
acactggagctcttcgacaaccgcctcacactggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggttgcgcaacaaccccattgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggatctgggtgagctcaagaagttggatttc
atctctgacgcagcctttgtgggcctcatcaatctacgctacctgaacctgggcatgtgc
ggactgaaggacattcccaaactgacggcccttgttcggttagaggagctggagctgtcg
ggaaaccgactggagatcatcagacccggctccttccagggcctggtgtccctccgcaag
ctgtggctaatgcattcacaggtgtccgtcatcgagcgcaatgctttcgatgacctgaaa
aacctggaagagctcaacctgtcccataactccctgcattccttgccccatgacctcttc
acaccccttcatcagctggagagggtacacctcaaccacaacccctggatctgcaattgt
gatgtgctttggctcagctggtggttaaaagagacagtgcccagcaacaccacctgctgc
gcccgctgccatgctcccccattcttaaagggaaagtacattggagagcttgaccagagc
cacttcacctgctatgcgccggtcattgtggagccacctacagacctcaatgtcactgag
ggtatggccgctgaactcaagtgtcgcacaagcacctccacaacatccgtcaactggatc
acccctaatggcacattaatgacccatggttcctaccgggtgcggatatctgtcctgcat
gatggcacactcaacttcacgaatgtcaccctgcgtgacacaggccagtacacctgcatg
gttaccaatgctgctggcaataccacagcgactgctgtcctcaatgtcactgctgctgat
gccagtgtcaactacacctacttcacaacggtcacagtggaaacagttgagacgccagga
gaggaagagtctgcattggtagccatcaacgaaacattcatccgtgtccaccctggcccc
acgccatcaggccacttgtggcccgatggtgtttctaccacagcctcctctctgtcagct
ggctggtcctcctccactcctcgggccacccgacccacgttcactgtgcccatcacagag
ccaggcttctcgggcctggatgatgtgatgaagaccaccaagatcatcattggctgcttt
gtagccattacctttatggcagcggtgatgctagtggtattctacaagctgaggaagcag
caccagttgcacaaacaccacggccctgctcgtgctattgagattatcaatgtagaggat
gagctgggggctggggccagtgggagaggcagtggcatctcaggaggctccactgtgacg
cagagcgggagcagtggaataggagggggccagagcctcaggctgcaccacccagagatt
gtcaacctgccgaacctggcccgatcagagcacctcaaccactactacaaatcccatcac
ttcaacaacaacatgatgggcctgggcatgggcactggcactggtgtggtcctcaacaac
aacaacaacccctcgccttgttctcagtcacaaaacacgtccatatcttgttcccaggtc
ccaaccagtggaggaacgcccacaggtggcaccctgccctctccagtgcccctgccccag
atgggtctccacagttctctgaaaggccttatggggaaaaaccagaatgagcccctgctt
tttaagagtggctctaaggaaaatgtgcaagagactcaaatttga
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