Plectropomus leopardus (leopard coralgrouper): 121957011
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Entry
121957011 CDS
T07454
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121957011
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121957011
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
U-box type E3
121957011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC_2
zf-CCHC
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121957011
NCBI-ProteinID:
XP_042361430
LinkDB
All DBs
Position
17:24659404..24681130
Genome browser
AA seq
1782 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGPHITLRDLKRQIMGREKLRAGDCDLQITNAQSKEEYTDD
EGLISKGSSVIVRRIPVIGARPSSGSKIRKVERSDVQLSHSFGAFKAMDDQNSSKAAPLF
SKMANLAEANVSEEDKLNAVLQQSSYDSMNYSKKFAAVLPSNYTCYRCGNTGHHIRNCPN
SGPDKNAEAPVRMKKSTGIPRSFMVEVDDPNMKGAMLTNCGRYAIPAIDAEAYAIGKKER
PPFASQEQPKSEDEEDPVPDELLCLICHDLLSDAVVIPCCGNSYCDDCIRTTLLDSEEHV
CPTCSQSDVSPDTLIANKFLRQAIDNFKRERGHTKSLKRGCGSSQSQNPTPTPSPVPTPP
PLTLQSQNQRHHLSTSSQQDPLLYLSQAADTPPLSQVCGALLTVTGPTSTENTLSTSLQL
EIPDKEAEEKTHEDSATATTPSGPVSPKDPTDAPSQLIPLGTLTPEGEEPQTVSVNLQQP
SSDPTQRPSGPPACWESSSSSSGCPPGGWNESNTQQHPPSSSSSSYQATPPPLFPSPHFH
AFLSTQQPLGSYPPGYPPTTPVWALPNLQGAPIPSLCPSASIPALIPKEWYRYQRKAERS
PHRGSSHRRSSSRSYSKSSKSKSSRSYSRSSSRSRSRSRSQSRSRPHSPYSRHRHLHTRS
HSSRSYSYGYRRSPSPSSSSSPRVGNHSRSKSPSDHRKSSHHSRHHSRKSTSSSCTSRRR
GEHSEREAGGSGGSFAPYPYAQHPDQTSSLEPDRERYLQWKREYKEWFDKYFSSYVGHFH
QLPLPLLSLPPPPEWGEREGSRNHSDANSDSRHQSRRSSRRMDGRSPPSQSSSDSRSPPS
QSSRDSRSTPSQSSSDSRSSPSHSSNDSRSPPSQSSSDGRSTPSEDGAQRRCSRLPATPA
KNRKKEDLKEGSKDGQQLIAKNLANLSVLKHEQNSTKKHEEARREASSSTDAADSTDDCR
KDKRKNKTESKDGSPAQDKAAASNAVESVQPLVKPDKHLDKEHERKSREQRNLEEEKGWR
RGKYSDSRRDSERKHREKSRTESCRVDTDRYLGGSRASDSRSERSRKRKGEDTEQSSVTA
QSYKTKTAEDPETQRSESPNSFDRKKPKMETKKERKTWPLTEEDIWEGGIKVKPPKKISI
NINLDGKRKEEKTEKQDLSYLESIRVKAKEGNREDEKLNRGETKIEANEKEDSSRDMEDV
SEGKIETDEREAGQKWEKATFRDDEGEPLEKKQDGENMEFDFWHSVLTGMEDEKMESKTQ
WEEGEGIEVIDDEKRSMRGGKEEQVMEDFVSLKDGAEGENTENSPVRSRNKSHCDGPNTT
VDDGSSHEDREERKRVVKTLEEYAQDRAADREDELVLIQVPRSKWEKEESEEEERDQGGI
TAQTDALATFLHSPSVSVTAEPPANMETETEEKRERSVELQRGRDREGQKHHILVSSHRN
VAPSSGRHRTDLSSERDGGKRMEGERWRNRERERGRERSRDRQKESKRSKDRIREEEKGR
DRRKERASPRRNALPSSHSYSYSTSHDTERRDRQQGGDLGGNKSSSSPGGKLSGDSSRAT
ELPKQNTHKSYSATVMDFKLKDKDRDYHNHQDQSGNYRSTGNHHPQKRDPLPSGSELSKP
RISSPEWEIMQNTSRNESKVEKGEWKLQQIIRESRGERDKQEMKKAMVAEGEGGCRREDE
ADELGRRRELEEVERPSSRSDSVSSSASQENGRDDGRKEKKKKHKKEKRQNTPELLDDEE
LKKRKKTSKKSRDGREEESSGRMDDRWKEEDDHTQLCSLMLS
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcattataaattctcctccaaactcagctacgacacggtggtgtttgac
ggcccgcacatcacgctgagggacctgaagaggcagatcatgggcagggagaagctccga
gccggggactgcgacctgcagatcactaacgcacagagcaaagaagagtacactgacgat
gaaggtttgatctctaaaggctcctccgtcatcgtcagaagaatcccagtcattggagca
agacccagctcaggcagcaagatccgcaaagtggagcgatcagatgtccagctttcccac
tcctttggagccttcaaagcaatggatgaccagaattcctccaaagccgcacctttgttc
tccaagatggctaacctggctgaagcgaatgtgtcagaggaggataagctcaacgccgtg
ctccaacagtcctcctacgactccatgaattacagtaagaagtttgctgctgtacttcct
tcaaactacacctgttatcgctgtggaaacactggacaccatatcaggaactgtcccaac
agtgggccggataaaaacgctgaggcccctgtgagaatgaagaaaagcacaggaatccct
cgttccttcatggtggaggtggacgatcccaacatgaagggagccatgctgacaaactgt
ggacgctacgcgattcctgccatagacgctgaggcgtacgccatcggcaagaaggagagg
cctccgttcgcttcacaggagcagccaaagtccgaagacgaggaggatcctgtacctgac
gaactcctctgtctgatctgtcatgacctgctgagtgacgctgtggtcattccctgctgt
ggaaacagctactgtgacgactgtattcgcaccaccttactggattcagaggaacacgtc
tgccccacatgtagccaatcagatgtctcacctgataccctgatagccaataaatttctc
cgacaggctattgacaacttcaagagagagcgaggccacactaaaagcttaaaaagagga
tgtggttcctcccagtcccaaaatccaaccccaacaccgagccctgtccccaccccgccc
cctctcaccttgcagagccaaaatcagagacatcacctttcaaccagcagccagcaggac
cctctcctatacctctcacaggctgcagacacaccgccgttatctcaggtgtgcggagcg
ctgctcacagtaaccggtcccacttcgactgaaaacacgctgagcacgtccctccagctg
gagatacctgacaaagaggctgaagaaaagacacacgaggactcagcgactgctaccacc
ccgtctggaccggtttcacccaaagaccccactgatgctccatcacagctgataccactg
ggtacccttactccagagggagaggagcctcagacagtcagcgtgaatctacagcagcct
tcctcagatccaacccaaagaccctccgggccaccagcgtgctgggagagctcctcttcc
tcctcaggctgtccccctggaggctggaatgaatcgaacacacagcagcatcctccctcc
tcctcctcctcttcatatcaagcgactcctcccccgctttttccctccccacatttccac
gccttcctcagcactcagcagcctctcggcagttacccccctggataccctccgaccaca
cccgtctgggctcttccaaacctccagggcgcacctatcccctccctgtgcccctctgcc
tccatccccgccctcatccccaaggagtggtacaggtatcagagaaaggcggaaaggtct
cctcacagaggatcttcccacagacgctcctcctctcgctcttattcaaagtcttctaag
tccaagtcttctcgctcctactctcgctcttcaagcaggtccagatcccggtccaggtcc
caaagcagatcaaggccccactcaccttactcccgccacagacacctccacacccgctct
cattcctcccgctcctatagctacggttacaggcgctccccatcaccgtcctcgtcatcc
tcacctcgagtgggtaaccattcaaggtccaagtcaccatcagatcaccgcaaaagcagc
catcacagtcgccaccacagtaggaagtcaacctcaagcagctgcacctccaggaggcga
ggagaacactctgagagggaggcgggaggctcagggggaagttttgctccttacccgtat
gctcagcacccagatcagacgagcagcctggagccggatagagagcgttacctgcagtgg
aaaagggagtacaaagagtggtttgataaatatttcagcagctatgtcggccacttccac
cagctgcctcttcctctcctcagtcttcctcctcctcctgagtggggggaaagagaggga
agcagaaatcactcagatgcaaactcggactctcgacaccaaagtagacgtagcagtaga
cggatggacggacgctccccgccatcgcagtcatccagtgacagccgctcccctccatct
cagtcttcacgtgatagccgctccacgccatctcagtcctccagcgacagtcgctcctct
ccgtctcattcgtccaacgacagccgatctcctccttcgcagtcgtccagcgatggacgc
tccacaccatccgaagatggagctcagcggaggtgcagccgcttgccagccacacctgca
aagaaccgcaagaaagaggacctgaaagaaggaagtaaagatggccagcagttaatcgcg
aagaatttggcgaacctcagcgtcttaaaacatgagcaaaacagcacgaagaaacacgag
gaagcaagaagagaggcgtcatcctccactgatgctgcagactcaacagatgactgcaga
aaggacaagcggaagaacaaaactgaatcaaaggatggcagcccagcacaggataaagca
gctgccagcaatgccgtagaatcagtccaaccactcgtgaaaccagataaacatttggat
aaagagcatgaaagaaaaagcagggagcaaaggaatttggaagaagagaaaggttggaga
agaggcaaatattcagactctaggcgggactcggagagaaaacacagagaaaaatcccgt
acagagtcatgcagggtggatacagacagatacctcggaggcagccgagcttccgattca
agatcagagaggagcagaaagagaaaaggagaggacacggagcaaagttctgttacagct
caaagctacaaaaccaaaactgcagaggaccccgaaacccaaaggagtgaatccccaaac
tcatttgacagaaaaaagccaaaaatggagacgaaaaaggagagaaaaacatggcctctg
acagaggaagacatctgggagggagggataaaagtgaaaccaccaaagaagataagcatc
aacataaacctggatggaaaaaggaaggaagagaaaactgaaaaacaggacttgtcttat
ttggagagcatcagagtaaaagcaaaggaaggaaacagagaggatgagaagttaaacaga
ggagagacaaaaattgaagcaaatgaaaaggaggactccagtcgagacatggaagatgtt
tctgaaggaaaaattgaaacagatgaaagagaggcaggacagaaatgggagaaagctaca
ttcagagatgatgagggagagccgttggagaagaaacaggatggagaaaatatggagttt
gacttctggcatagtgtcctcacaggaatggaggatgagaaaatggagagtaaaacacag
tgggaggaaggagaggggatagaggtgattgatgatgagaagaggagcatgaggggagga
aaagaagaacaagtgatggaagattttgtctctctgaaggacggggcagagggagaaaac
acagaaaactcaccagtgaggagcagaaacaagagccactgtgacggaccaaacaccacg
gtggacgatggcagcagccatgaggatcgtgaggagaggaagagagtcgtgaaaactttg
gaggaatacgcccaggacagagctgcagacagagaggacgagcttgtactcatacaggtc
cctcgctccaaatgggagaaggaagagtctgaggaagaagaacgggatcaaggagggatc
acagcccaaacggacgctctcgcgacgtttctgcattcaccatccgtgtctgtgacagca
gagccgccagccaacatggagaccgagacagaagaaaagagagagaggtcagtggaactg
cagagaggaagggacagggagggacagaaacaccatattttggtcagttcacacagaaat
gtggctccctctagtggcagacacagaactgacttgagttcagagagagacggggggaaa
aggatggagggggagagatggagaaatagagaaagggagagagggagggagagatcaagg
gacaggcagaaagagagcaaaagatcaaaagatagaataagagaggaagagaaagggaga
gacaggaggaaagagagggcttcccctagaaggaatgccctgccctcctctcactcttac
tcttattcaacgtcacatgacacagagaggagagacaggcagcaaggcggcgacctcggc
ggcaacaagagttcctcttctcccggcgggaaattatccggtgacagcagcagagctact
gaactgccgaaacaaaatacccacaaatcgtacagtgccacagtaatggactttaaattg
aaagacaaagaccgagactatcacaatcatcaagatcaatcaggaaactacagatcaaca
gggaaccaccacccccagaagagggaccccctcccctccgggtcagagctcagtaaaccc
agaatcagcagccctgagtgggaaataatgcagaacacgagtagaaatgagagcaaggtt
gaaaaaggcgagtggaagctgcagcagataataagagaaagcagaggagagagagataaa
caagaaatgaagaaagcaatggtggctgagggagaaggtggttgtcgacgggaggatgaa
gccgatgaactggggcgaaggagggaactggaggaagtggagaggcccagcagccgcagc
gacagcgtcagctcatcggcgagtcaggagaacggcagagacgacgggagaaaagagaaa
aagaagaaacacaaaaaggagaaaagacaaaatacaccagagctgctggacgatgaggag
ctgaagaaacgcaagaagacgtcaaagaaaagcagagatggaagagaggaggagagcagt
ggaagaatggacgacaggtggaaagaggaggacgaccacacgcagctctgctcgcttatg
ttatcttga
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integrated database retrieval system
