Plectropomus leopardus (leopard coralgrouper): 121957573
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Entry
121957573 CDS
T07454
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121957573 (vps50)
Membrane trafficking [BR:
plep04131
]
Protein recycling
Others
EARP complex
121957573 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
121957573
NCBI-ProteinID:
XP_042362141
LinkDB
All DBs
Position
18:complement(16741718..16875438)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETSPAPDD
AAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISRL
MQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIAQ
LHEFKFMGQCRSPSVSPSRQAASLTSPAQEELSLFQQYLQEGNPFEMPAEHKEEETEDVL
ASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDVPLKSVSRETIRSKKKSDYNL
NKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDM
YESSGLGLISSRLRTTLNRIQESLIDMEAVGENAGVHSAAEDRKEKVPSPHLSQLVVLTN
SGTLYGLAQRVVATESLVFLAEQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELRKP
IYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHVRI
PLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPD
KEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccggcagggcctgaaaagcccccaagaaagcatg
gcagacctgagtcctgtggagaacctgaggataccgagcaaggaggagttgcgggagctg
agggagcagcccattgacccccaggctgagcaggagatcattgacagcatcgaggaggtc
tacttctcgaacgactccttcgacatggtgcagcacgaactggagaaacttccaccagag
ctgaacctgcaggagctggaggagtacagagataagctgaagagacaacaggctgcagtt
tctaaaaaggtcgctgatctcattctggagaaacagcctgcttacgtcaaggaactggaa
cgagtgacggcattacagaccaacctgcagctggcagcggtcatttgcactaatgcaagg
aggcaactgagcgttgcaaaggaaggattcactgaagccagcttgggtctattggccaat
cagaggcggcgacaactgctgacaggcttgcttaagtcactgaggaccatcaagaccctg
caaagaacagatgtaagactcagcgaaatgcttgaggaggaagactatccaggtgcaatc
caactctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgtatcagc
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctgtcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcctac
acgctcctaggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacggtgttccaagtggtgctgggatatgtggagctgtgtgctggcaatgct
gataccaagtttcagaagatgcagtataaagacctgtgcacgcatatcaccctggacagc
tacattccctgtctgacagacctatgcaaagcattatgggaggtgatgctgagctaccac
cgcaccatgcagtggcatgaggagcatgacaaacaggagaccagccccgctccagatgac
gcagcagagtcggatgagtcggtggtggaccgcagctatgtgaagaagaagctggagcat
gggctgacaaggatctggcaggatgtccagttgaaagtgaaggcctacattctggggacg
gacatgtcaaacttcaaatacgacgatttcatagtggtacttgatgtcatcagcaggttg
atgcaggtgggtgaggagttctgtggcagtaagtcagaggtcctgcaggagtccatcaaa
cgccagagtgtgaactactttaaaaattaccacagggcgcgacttgaagagctgaggatg
tttctggaaaatgagacatgggaactttgcccggtcaagtctaacttcaacattgcccag
ctccatgagtttaagtttatgggccagtgccgttctccttccgtatcgccgagcagacag
gccgcgtccttgaccagcccggctcaggaggagctgtcgttgttccagcaataccttcag
gagggaaacccctttgagatgcctgctgagcacaaagaggaggagacagaggatgtgctg
gcatctaacgggtatgagtcagacgagctggagaagagtgtgtatcaagattatgacagc
gacagtgatgtccccgaggagctcaagcaggactacgtagatgagcaaacaggcgatgtc
cccctcaagagtgtgtctcgagagaccataagaagcaagaaaaagtcggattacaacctc
aataagaccaatgcaccgattctcacaaacaccaccctcaacgtcatccggcttgttgga
aagtacatgcagatgatgaacattctgaagccaatcgccttcgatgtcatccactgtgtg
tcacagctctttgactactacctgtatgctgtatacaccttctttggacgcaatgacatg
tatgagtcatcgggtctgggccttatcagcagcagactgagaaccacactgaaccggatc
caggagagcctcattgacatggaggcagtaggggagaatgcaggcgtccacagtgcagca
gaggacaggaaggagaaagtgcccagccctcatctcagccaactggtggtcctcactaac
agcgggactctttatgggctggcacagagggtggtggccactgagtccctcgtgtttctg
gctgaacagtttgaatccctccagtcccacctggacacaatgatgcctgcagccaagaag
cccttcctgcagcagttttattcccagacggtgtctacagccagcgaacttcgaaaacca
atatactggattgttgctgccaaggccatcgactacgaacagatgttgctcatgatggca
ggagttaaatgggacatcagggaaataatgtcgcagcataatgtttatgtggacgtcctg
ctgaaggaatttgagcaatttaacaagcggctgggggatgtttccaggcatgtccgcatc
ccgctgcctgtgtccaacgtcctgtgggagcactgcatccgcctggccaacaggactcta
gtagaaggctatgctaatgtgaagaaatgtagcaatgagggtcgggccctgatgcagctg
gacttccaacagttcctcatgaagctggagaagctgaccgacctgcgacccatccccgat
aaagagtttgtcgaaacttacatcaaggcctattacctgacagagaatgacatggagcag
tttatcaagaatcacagggaatactccatgaagcagctggccaacttggtgaatgtttgt
ttgggttcacatataaacaagaaggctcgtcagaaactcctggcggccattgacgacatt
gacagacccaagagatag
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