Plectropomus leopardus (leopard coralgrouper): 121957675
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Entry
121957675 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plep00535
]
121957675
Proteoglycans [BR:
plep00535
]
Extracellular matrix (ECM) proteoglycans
Others
121957675
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
121957675
NCBI-ProteinID:
XP_042362332
LinkDB
All DBs
Position
18:184101..390227
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AA seq
1870 aa
AA seq
DB search
MQFSVRLSVCLLGFVLVSLIPQPARGQVSSPRRFRTKVLSPTKLHVSWKEPKGQFESYKV
IYNTRPGGEQREVQVSKQDAKLLIEDFDASKEYNFKIIAVSGGQMSKPLQAKYEGQQSGV
EMVQSQRRQDSGVTEENNEISEVADEFMCKTPAIADIVILVDGSWSIGRINFRLVRTFLE
NLVKAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVMDAVKNLPYKGGNTLTGLALT
FILENSFKTESGSRPGVPKIGILITDGKSQDDVIPPAQSLRDAGIELFAIGVKNADENEL
RAIASPPEETHVYNVADFSVMSDIVEGLTKTVCDRVEQLDKQIKGGGQPAPPPTSVAPPS
NLVTSDITARSFRVSWTHAPGQVEKYRVVFYPASGGKPEEKVVLGTDNSVELSYLNSLTE
YQVAVFAVYRSSASEALRGSATTLALPMVNDLELFDITHSTMMVRWRIAAGASGYMILYA
PLTEGDPADEKEVKVEGSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQETTLPLTP
ARNLRFSDVGHSSSRLTWDSASRKVKGYRIMYVKTNGVQTNEVDVGRVTSWLLRNLTSLT
EYTVGVFAVYDEGQAEAVTDSFTTKTVPDPVDLRISDISTDSFRVSWQHPAADVVLYRLT
WTPTDGGDSEEVLVDGHINTYLIRGLDPLTEYEVLLTAVYANEVESDEVILVESTAERMT
TVATTTTTTATPRYGVRNMRIDEETTFSMRVAWQPVDTRNVRHYRLSYISARGDRAEETR
TVPTGQNSLVLQPLLSDTEYKIAITPVYLEGDGPTAARMGRTLPLSAPRNLRVSEEWYNR
FRISWDVPPSPTMGYRVVYQPLSAPGPALETFVGEDVNTMLIVNLLSGTDYSVKVIASYT
TGSSEALAGRAKTLYLGVTNLNTYQMRMNSFCAQWQTHRHASAYRVVIESLLNGQRQETK
LSGSANRHCFNNLKANTQYKMSVYAQLQDGTEGPAVTVIDKTLPVPTPAPTPAPTTTPLP
TIPPAKEVCKAAKADLVFLVDGSWSIGDENFVKIIRFLYSTTGALDLIGPGGTQVAIIQF
SDDPRTEIKLNSYADKERLLEAINRISYKGGNTKTGRAIQHVKENIFTTEGGVRRGVPNV
LVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FRKIEEKLVTFVCEAATATCPSVPMSGSATPGFRMMELFGLEENRYGSISGVSMVPGTFN
TFPCFHLHSDAFLAQPTRYIHPEGLPSDYTISLLFRLLPDTPEEPFALWEILNKNNEPLV
GVILDNGGKTLTFFNNDYKGDFQTVTFEGPEIKKKKLFYGSFHKLHIAISKTSAKVVIDC
KMVAEKTINAAGNITIDGLEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWASRDKCCEL
PGLRKEVDCPAMPKACTCTQDSKGPPGPAGPPGGPGIRGARGDRGEPGPVGPTGPVGDTG
VPGPQGPQGPQGPSGRSIIGPPGAPGERGQKGEAGQQGAQGVSGRPGAPGREGPAGSRGL
PGKDGPPGRQGPTGTIGTPGAPGAPGNTGPPGKQGELGPPGPPGSKGDKGERGDLQSTAS
VQAIARQVCEQLIQSHMARYNSILSHAPSPPVSIRTVPGPPGEPGRPGSPGPQGEQGPPG
RPGFPGQNGQNGQPGERGQSGEKGEKGSQGVGVQGPRGPTGPPGPQGQGRPGSQGPSGRP
GNPGAPGRPGVPGPVGSAGPPGYCDQNACVGYNVGDGEDVIERSAVPAVQLPPDVFQNYG
EVEEDDPYRYYEPNYPAPRPVAPGDPALDNIELSSPGVHRSARSLEGEEETFGPKRRLKR
GAKTLPGLIK
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcgtctgcctgctgggctttgttcttgtctctctaatc
cctcagccagcgcggggtcaagtttcatcaccaaggagatttcgcaccaaagtcctgagc
cccaccaaactgcatgtgtcgtggaaggaaccgaaaggacagtttgaaagctacaaggtc
atttacaacacacggccaggtggagagcagagggaggttcaggtatcgaagcaggacgca
aagctgctcatcgaggactttgacgcctcaaaagaatacaactttaagataattgcagtc
agtgggggacagatgagcaaacctcttcaggccaaatatgaaggtcagcaatccggcgtg
gagatggttcagtctcagaggagacaggacagcggtgtcaccgaggagaacaacgagatc
tcagaagttgcggatgagtttatgtgtaaaactccggccatagccgacatcgttattctg
gtggatggctcctggagtatcggccgcatcaacttcaggctggtcaggacattcctggaa
aacctggtcaaggccttctccgtggagttcgacaagaccaggataggcctggctcagtac
agcggagaccccagaatcgagtggcatctcaatgctcacaccaccaaagaggctgtgatg
gacgcggtgaagaacctgccgtataaaggaggaaacactctgacaggtctggctctgacc
ttcatcctggagaacagctttaaaaccgagtctggatccaggcccggcgttcccaagata
ggcatcctcatcacggacgggaagtcccaggatgatgtgataccgcccgcacagagcctg
agggatgctgggattgagctgtttgccatcggtgtgaaaaacgcagatgagaacgagctg
cgggccatcgcctctcctcccgaggaaactcacgtctacaatgtggcggacttcagcgtg
atgagcgacatcgtggagggcctcaccaagacggtctgtgaccgagtggagcagctcgac
aagcagatcaaagggggaggacagcctgcccccccgcccacctctgtggcgccacctagc
aacctggtgacatctgacatcacagctcgcagtttccgggtgagctggacccacgcgccg
ggccaggtggagaaataccgtgtggtgttttacccagcgagcggaggaaagccagaggaa
aaggtggtcctcgggacagacaacagtgtggagctgagctacctgaactctctgactgag
taccaggtggccgttttcgccgtctaccgcagctctgccagcgaggccctgagaggaagc
gccaccacattggcgctgcccatggtgaacgacctggagttgttcgatatcactcacagc
accatgatggtccgctggaggatcgccgccggcgcatctggatacatgatcctgtacgct
ccgctgactgagggagaccctgcagacgagaaggaggtgaaggtggagggctcggtgaac
gaggtggaactggagggattgaccccggccacggagtacacggtgacggtgtacgccatg
tatggagaggaggccagcgaccccatgaccagccaggagaccacattaccgctgaccccg
gcgaggaacctgcgtttctcagacgtgggccacagctcgtcccggctcacatgggactcc
gcctccaggaaggtcaaaggttaccgcatcatgtacgtcaagaccaacggagtccagacc
aacgaggtggacgtcggccgcgtgacatcctggctgctacgaaacctgacctccctgacg
gagtacacagtcggcgtctttgcagtttacgatgagggacaagctgaggccgtgacggac
agcttcaccaccaaaaccgtcccggacccggtggatctgaggatcagtgacatctccacc
gacagcttcagggtgtcatggcaacacccggccgctgacgtggtgctgtaccgactcacc
tggacgcccacagacggaggagacagtgaagaggttctggtggacggacacatcaacacc
tacctgataagaggactcgaccccctcaccgagtacgaagtcctcctcactgcagtctac
gcaaacgaggtcgagagcgacgaggtgatcctcgtagagtccaccgctgaaagaatgacc
accgtcgccacaacaaccaccaccacagcaactcctcgttacggggtaaggaacatgagg
atcgatgaggaaaccaccttcagtatgcgggtggcgtggcagccggtggacacgaggaat
gtccgacattatcgactgagctacatcagcgccaggggagaccgagcagaggagacgagg
acggtgcccacaggtcagaacagtctggttctgcagcccctgctctcagataccgagtac
aaaatcgccatcactcctgtttaccttgaaggagacggacccacagcggcacgaatggga
cgaacacttcctctctcggctcccaggaacctgcgggtgtccgaggaatggtacaaccgc
ttcaggatcagctgggacgttcctccctcacccaccatgggctacagggtcgtctaccag
cctctctcagcccccggaccagctctggagaccttcgtgggagaggacgtgaacaccatg
ttgatcgtcaacctgctgagcgggacggactacagtgtcaaggtcatcgcctcctacacc
accggatccagcgaggccctcgcaggcagagccaagaccttgtatctgggagtgaccaac
ctgaatacataccagatgaggatgaacagcttctgcgcccagtggcagactcaccgacac
gccagcgcctacagggtggtcatcgagtctctgctcaatggtcagaggcaggagacgaag
ctgagcggatcagccaacagacactgtttcaacaacctgaaggccaacacgcagtataag
atgagcgtgtacgctcagctgcaggacgggaccgaaggccccgccgtcaccgtgatcgat
aagactctccccgtcccgaccccggcgccgacccctgcccccaccaccacgccgctgccc
acaatcccgcctgccaaggaagtctgtaaggcagccaaagccgacctggtcttcctggtc
gacggctcctggagtatcggagatgaaaacttcgtgaagatcatccgcttcctgtacagc
accaccggagctctggacctgatcggcccgggcggcacacaggtggccattatccagttt
agtgacgacccccgcaccgagatcaagctgaactcgtacgccgacaaggagcgactgctg
gaggccatcaacaggatcagctacaagggaggaaacaccaagacaggtcgagccatccag
catgtgaaggaaaacatcttcacgacagagggaggagtcaggaggggagtccccaacgtc
ctcgtggtcctcaccgacggccgatctcaggatgacgtcaacaaagtgtccaaggagatg
cagatggaagggtacattgtgtttgcgatcggcttcgccgacgctgactacggcgagctg
gtgagcatcgccagtaaacccagcgacagacacgtcttctttgtggacgacctggacgcc
ttcaggaagatcgaggagaagctggtgacctttgtgtgtgaggccgccaccgccacttgt
ccgtctgtaccgatgagcggcagcgcaacaccaggtttccgtatgatggagctgttcggc
ctggaggagaatcggtacggcagcatctccggtgtttccatggtacccggcaccttcaac
accttcccctgtttccacctgcacagcgacgctttcctggcacagccgaccaggtacatc
caccctgaggggctgccctccgactacaccatcagcctgctgttcagactgctgcccgac
actcccgaggagcccttcgccctctgggagatcctcaacaagaacaacgagccgctggtg
ggagtcatcctggacaacggaggaaagacgctgacgttcttcaacaacgactacaaggga
gacttccagacggtcaccttcgaagggccggaaatcaaaaaaaaaaaactcttctacggc
agcttccataagcttcacatcgcaatcagcaagacgagcgccaaagtggtgatcgactgc
aagatggtggccgagaaaaccatcaacgctgcgggaaacatcaccatcgacggactggaa
gttctgggccggatggtccgctcccgagggaacaaggacaactctgcaccgttccagctt
cagatctttgacatcgtctgcagcacgtcgtgggccagcagagacaagtgctgcgaactt
cctggtctgaggaaggaggtagactgccccgccatgcccaaagcctgcacctgcacccag
gacagtaaaggcccccccggccccgcgggaccaccaggaggcccgggaatcagaggagcc
agaggggatcgaggagagccgggcccagtgggcccgactggtccagtaggtgatacaggt
gtcccaggacctcagggaccccaaggaccacagggacccagtggacgctcaatcatagga
cccccaggtgctccaggagagagaggacagaaaggcgaggctggacaacaaggagctcag
ggagtctctggcagacctggagctccaggcagagaaggacctgcaggatccagaggacta
ccgggcaaagacggcccgccgggcagacagggtccaacaggaaccatcgggacgccggga
gccccgggggccccgggtaacacaggccctccaggaaaacagggagagctgggaccaccg
ggtcctcctgggagcaaaggagacaaaggtgaacggggcgacctgcagtccacagcatca
gttcaggccatcgccaggcaggtctgcgagcagctcattcagagccacatggctcgctac
aactccatcctgagccacgcgcccagtccgccggtgtccatccgcacggtgccgggaccc
cccggagagcctggcaggccgggaagtccagggccacagggagagcagggacccccagga
agacccggcttcccgggacagaacggacagaacggacagccgggagaaagaggtcagtca
ggagaaaagggtgagaaaggatctcaaggcgtcggagtccaaggcccccgaggacccacg
ggaccccccggtccccaaggccagggcagacctggcagccagggtccctcagggcgacct
ggaaatcctggagcccctggtcggcctggagtcccaggacctgttggttctgctgggcct
ccgggttactgcgaccagaacgcctgtgtgggctacaacgttggagatggtgaggatgtc
attgaacgcagcgctgtccccgcagtccaactgccgcccgatgtcttccaaaactacggc
gaggtcgaggaggacgacccctatcgctactacgagcccaactaccctgcgccgcggccc
gtggcgcccggcgacccggcgctggacaacatcgagctgagttcccccggcgtccaccgc
agcgcccggagcctggagggagaggaggagacattcgggccgaagaggagactaaagaga
ggagcgaagacgctgcccggactaattaaatga
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