Plectropomus leopardus (leopard coralgrouper): 121957748
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Entry
121957748 CDS
T07454
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121957748 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121957748 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121957748 (vps28)
Membrane trafficking [BR:
plep04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121957748 (vps28)
Exosome [BR:
plep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121957748 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
121957748 (vps28)
Exosomal proteins of colorectal cancer cells
121957748 (vps28)
Exosomal proteins of bladder cancer cells
121957748 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
121957748
NCBI-ProteinID:
XP_042362440
LinkDB
All DBs
Position
18:complement(19990884..19998422)
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AA seq
223 aa
AA seq
DB search
MFHGIPVTGGVGAAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTASCSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgggataccagttacaggaggagtgggagcagctccagccaataagcctgag
ttatatgaggaggtgaaattatacaagaatgcaagagaacgagagaagtatgataacatg
gcagagctgtttgctgtcgtcaagacccttcaggccctggagaaggcttacatcaaagac
tgcgtcacacccaatgagtacactgcttcctgttccaggctgctggttcagtataaggct
gctttcaaacaggtgcagggctctgatgtgggctccatcgatgatttctgcaggaagtac
agactcgactgcccactcgccatggaaaggattaaggaggatcggccaatcaccatcaag
gatgacaagggcaacctgaaccgctgcattgcagatatagtttccctcttcatcaccgtg
atggacaagctgagactggagatcagggccatggatgagatccagccagacctgagggaa
ctgatggaaaccatgaacagaatgagcaacatgcctccagactcagaggctaaggacaaa
gtcagcctctggttgactaccctcagcagcatgtcagcctcagacgagttggatgataat
caggtgcgccagatgctgtttgacctggagtcggcctacaatgccttcaaccgcttcctc
cactcctcctaa
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