Plectropomus leopardus (leopard coralgrouper): 121958087
Help
Entry
121958087 CDS
T07454
Name
(RefSeq) LOW QUALITY PROTEIN: twinfilin-2-like
KO
K14962
COMPASS component SWD2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121958087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121958087
03036 Chromosome and associated proteins [BR:
plep03036
]
121958087
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121958087
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
121958087
COMPASS/SET1 complex (yeast)
121958087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cofilin_ADF
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WD_LRWD1
MinC_C
Beta-prop_DCAF4
DUF6439
Motif
Other DBs
NCBI-GeneID:
121958087
NCBI-ProteinID:
XP_042362892
LinkDB
All DBs
Position
2:27078448..27096958
Genome browser
AA seq
622 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENTDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SXKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMLVLGAYREPEKSWDQDYDRFLLPLLDGQEPCYILYRLDSQNAQGYEWIFISWSPDQ
SPVKQKMLYAATRATVKKEFGGGHVKYEIFGTAEEDICLQGYQRHVSSCSGPAPLTLAEQ
ELQRIKITEGRVKQVKTEISVESKHQTLQGLAFPLQETAKRALLQLAQKRINYIQLRLDV
EKETIELVHCNPTETRDLPRRVPKDTPRYHFFLYKHSHEGDYLESVVFIYSMPGYSCSIK
ERMLYSSCKSRLLEEVEKDYHLEIAKKLEIDDGDELTEDFLYEEVHPKQHAHKQAFAKPR
GPAGKRGHKRLIKGTGGTTHES
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggacaatgtgctgcggagcttcagagttgctaaggtgtttcgagaaaac
acagacaaaattaattgtttcgatttcagttcaaacggagaaacgattatttccagcagc
gacgacgactcattagtcttatacgactgccaagagggaaaacccaagaggactctctac
agcnaaaagtatggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgataccatccggtacttgtccctccatgacaataaatacatc
cgctactttcctggccataacaaaagagtgacatctctctccatgtctcctgtggacgac
acatttatttctggctcactagataaaacaatcagactgtgggatttgcggtcgcctaac
tgtcagggtctgatgcacctacaagggaagccagtgtgctcctttgatcccgagggtctc
atttttgctgccggaataaattcagagatggttaaactttatgatctgcggtcgtttgac
aagggtccctttgcgaccttcaagcttcagtatgaccgaacatgcgagtggacaggactc
aagtttagcaatgacggaaaactcattcttctttctacaaacggtggagcccttcgcatc
ttagatgcttttaagggcgctgtgctacattccttcgggggctacaacaacagtaaaggt
gtgacactggaggcatcattcaccccggattctcagttcgtcatgattggctctgaggat
ggaaagatccatgtgtggaatgcagagagcggcatgaaggtggctttattagacgggaag
cacacaggaccaataacctgcctacagttcaaccccaagttcatgacgtttgcaagtgcc
tgctccaacatgctggttctgggggcctatagagagccagaaaagagctgggaccaggat
tatgatcgcttcctgctgcctctcctggacgggcaggagccctgctacatcctgtaccgc
ctcgactcccagaatgcacagggctacgagtggatcttcatttcgtggtctcctgaccag
tctccggtgaaacaaaagatgttgtacgctgccacccgagcgacagtgaagaaagagttt
ggcggtggccatgtgaagtacgagatttttggcacagctgaggaggacatctgtttgcag
ggctaccagcgtcatgtgtcatcctgctcaggtcctgccccgctcacattagccgagcag
gagctgcagaggattaaaatcacagagggccgggttaaacaggtgaagacagagatcagc
gtggagagcaaacaccagacacttcagggcctcgctttccctctgcaggagaccgcaaaa
cgagccctgctgcaactcgcccaaaaacgcatcaattacatacagctgaggttggatgta
gagaaagagacaatcgagctggtccactgcaacccgacagaaactcgtgatttgccccgc
agggttccaaaagacactcccagataccacttcttcctctacaaacactcccacgaagga
gactacctggaatctgtcgtattcatatactctatgccaggatacagctgtagcatcaag
gagcggatgttgtattccagctgcaaaagtcgactactggaggaagtggagaaagattac
catttggaaattgctaaaaagttggagattgacgacggagatgaactgacagaagatttt
ctgtatgaggaggtccatcccaagcagcacgcccacaaacaggccttcgctaagccccgc
ggcccagcaggaaaaaggggacacaagcgcctcattaaggggacaggagggaccacgcat
gagagctag
DBGET
integrated database retrieval system
