Plectropomus leopardus (leopard coralgrouper): 121958398
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Entry
121958398 CDS
T07454
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plep03037
]
121958398 (ift140)
Cilium and associated proteins [BR:
plep03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
121958398 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_WDR19_1st
TPR_IFT80_172
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WDR55
WD40_Prp19
Beta-prop_HPS5
TPR_GEMI5
Clathrin
TPR_12
TPR_COPA_B
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
WDR54
TPR_2
RNase_HII
Consortin_N
WD40_MABP1-WDR62_1st
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
121958398
NCBI-ProteinID:
XP_042363231
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All DBs
Position
19:complement(16971424..17002819)
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AA seq
1449 aa
AA seq
DB search
MAVYFDHRIEAPESSGVPSQLTWHSALPVLAVASNSHTVGGNVDLYLQQGEYVESCHLER
PHQPAVLHWHPIKPVLAVGWENGEVVLLTHPSGDQTVLPSTHAACITLLEWSSSGSRLVT
ADENGALAVWKVDARGRLQGNHLVKHEYKSPLTCCIFRPASPGDDVAKLARASVSGDESA
LDMFSWKGAPLKMGPQEGLAFYVSTAEGKVHSVDEHCKTSTLLSVEGAIKKLFYLEKREA
LAVITETMMLSQYTLGPEGGAKEFMKVKLSSRTGQNVDIVWTENGLLITATGEQVIRLWD
LEGDDNYVLHLDDTLGYERGEMINCVSYCTGKEILAAGTSHGRIAMWRMVVQSGSSRGDA
KAQWKLQTPTEVEGNVMQLQWGSSLNLLAANNSNTVLILSEHVMSAHFSQQVAAVQLAPT
QLSISQFTAGVHLALQSDIHVKGVCVTKDSVTVWSGKQVTVHELLGTVLRNTGSFPCDSH
VVAVHGDNLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLTDQIANLGALRSVKCNGNGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFIGRPSSGISQPEESERQQFQGTELSGRCPVSHFWDESEPRLFVCETVPIS
SESSSTNFLDTVDVSVVTLFCTQEHGLLLQDCYPRPPGLQALLALDVPYYYFSCKPGEKD
PGLAEISAPTSAPPQQTHPSRGSAAQFPHMVSRRALRDFVGLENCEKATRDAMLNFSFYL
TIGDMDEAFKSIKLIKSKAVWENMARMCVKTRRLDVARVCLGNMGNARAAKALKEAEAEP
EPEAKVAMLAIQLGMLEDAEKLYKSCQRYDLLNNFYQALGQWQQALEIAEKDDRIHLRTT
YYNYAKYLESMGNKSLALVYYEHSDTHRVEVPRMLQDDTSSLEIYVNKMKDKNIYKWWAQ
YLESQSDMDSALRFYECAQDYLSLVRVHCYMGNIQKASEIANDTGDRAASYHLARHYEGH
DDIRQAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNAEDMMEAACYYEEKGTHMDR
AVSLYHKAGYVSKALELAFATQQFSALQLIAEDLNEYSDPALLARCSDFFITHSQYEKAV
ELLVAAKKYHQALELCVTQSLTITEELAVRMTVTDSKDLSEEARKELLERIADCCMRQGN
YHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFATISRQKELFIMAANYLQSLDWRKNPE
ILKTIIGFYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAFKCLSKAKDSSTGQ
HEVRLADLQHRVTLIKKFVLARRLYAEDAGEAVRLCEALLEEPELDPAVRIGDAFGFLVE
HHCQQGNYQVAYRKLEELQRLLPTQNVRYYVSQASLEALQKELGIPMERGDCRHIVKEED
EVEEDLNVS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattttgaccaccgtattgaggccccagaaagcagtggtgtgccctctcag
ttgacctggcactcggctcttcctgtactggctgtggcctcaaacagccacaccgttgga
ggcaatgtagacctctacctgcagcagggagagtatgtggagagctgccatttagagcgt
cctcaccagcctgcagtgctgcactggcatcccataaagccagtgttggcagtaggctgg
gagaatggcgaagtggtgctgctgacacacccctctggagatcaaactgtccttcccagc
acacatgcagcttgcatcacactgctggagtggagtagctctggtagccgcttggtaaca
gctgatgaaaatggagcactggcagtatggaaggtagacgccagagggagacttcaagga
aaccatcttgtgaagcatgaatacaaaagccctctaacttgctgcatcttcagaccggcc
tcacctggggacgatgtggcaaagctcgcccgggcatcagtcagtggagatgagagtgct
ctggacatgttcagctggaagggagcgcctctcaagatgggcccacaggagggactggca
ttctatgtcagcactgcagagggtaaggtccacagtgtggatgagcattgtaagacaagc
acacttctcagtgtggagggtgccatcaagaaactgttctaccttgagaaaagagaggcc
cttgctgttatcactgagaccatgatgttgtcacagtacacgcttggacccgagggagga
gccaaggaatttatgaaggtgaagttaagcagcaggactgggcagaatgtagacatcgtc
tggacagagaatggcctcctcatcacagcaacaggagaacaggttatcaggttgtgggac
ctggaaggagatgacaactatgtattgcatctagacgacactctggggtacgagagagga
gagatgatcaactgtgtttcatactgtacaggaaaagaaatcttagcagctggtaccagc
catgggcgcatagcaatgtggaggatggtggtgcagtcaggcagcagcagaggtgatgcc
aaggcccagtggaaactacaaacacccacagaagtagaaggaaacgtcatgcagctacag
tggggctcgagtctgaatctgctggcggccaacaattcaaacacagtgctgatcctgagt
gagcatgtgatgtcagcccacttcagccagcaggtggcagcagtgcaactcgccccaacc
cagctcagcatctctcagttcactgcaggagtgcaccttgctctgcagtccgacatacat
gtcaagggagtttgtgttactaaggattcggtgacagtctggagtggcaagcaggtcact
gttcatgagcttttagggacagttcttcgcaatacaggatcgtttccttgtgactctcat
gtcgtagctgtacatggtgacaacctctacactgtggaacctaacagggtccagattcgc
accccccagggtacggtgaagcagctgcttaccttctccaaagcagaaggcaaccctgtg
ctactcagtgtgtgtcagtcttacctggtggtaggcacagacacagcacacattagagta
tttgacctctcccgaagagatgccaaagctcactgcagtgctaagaacctgactgaccag
attgccaatctgggagccttgaggtctgtcaaatgtaatggcaacggtagccaagtcagc
atcctaatctctcaggttaatgggcgaccagatcacaaagtgtacttttatgatgttgag
atggacactgtgacacactttgacttcttcatcggcagaccatccagtggtatctcacag
ccagaggaaagtgaaaggcagcagtttcaggggacagagctcagcggtcgttgccctgta
tctcacttctgggacgagagtgaacctcggctttttgtttgtgagactgtaccgatcagc
tctgaatcttcatcaactaatttcttggatacggtggacgtgtcggtagtaacactcttc
tgcacgcaggagcatggactcctcctgcaggactgctaccccaggcctccgggcctgcag
gcgctcctcgctctagatgtgccctactattatttcagctgcaagcccggtgagaaagat
ccagggttagcagagatttcagccccaacatcagcacctccacagcagacccatccatca
aggggttcagctgcccagttcccccatatggtgtcaaggcgagctctcagagactttgtg
ggccttgagaactgcgagaaggcaacccgagacgccatgctcaacttcagcttctacctg
accattggtgatatggacgaagccttcaagtctatcaagctcatcaagagtaaagcggta
tgggaaaacatggcacggatgtgtgtgaaaacccgccggctggatgtggcacgtgtgtgc
cttgggaatatgggaaatgccagggcagcaaaagcactgaaggaggcggaggctgaaccc
gagccagaagccaaagtggctatgctggccattcagctcggcatgctggaagatgctgaa
aagttgtacaagagctgtcaacgctatgacctgctgaacaatttctaccaggctcttggc
caatggcagcaagctctggaaatagcagagaaagacgatcgcatccacctgcgcaccacc
tactacaattatgccaaatacctggagtccatgggcaacaagagcctggcccttgtatat
tatgagcattcagacacacacagggtcgaagtgcccagaatgctccaggatgacacatca
tctctagagatctacgtcaacaaaatgaaagacaagaacatctataagtggtgggcccag
tacctggagagccagtcagacatggattcagcactgcgtttctatgaatgtgcccaggat
tacctctccctggttcgagtccactgctacatggggaacattcagaaggcatccgagata
gccaatgatacaggtgacagagcagcatcataccacctggccagacactatgagggccat
gatgatatcagacaggctgtccacttctacacacgagcccaggcctacaacaacgccata
cgactttgtaaggagaatggtctggatgatcagctgatgaacctggctttgctcagtaat
gcagaagacatgatggaggctgcctgttactatgaggagaaaggcacccatatggaccga
gctgtctcactctaccacaaggctggttatgtctccaaagctctggagttggcctttgcc
acccagcagttctctgcacttcagctgatcgcagaggatctgaatgagtactctgacccg
gccctcctggcacgctgctctgacttcttcatcacgcattcccagtatgaaaaggctgtg
gagttactggttgcagcaaaaaagtaccatcaagctctggagttgtgtgtgacccaaagc
ttgacgatcacagaggagctggcagtgagaatgactgtgactgattcaaaagacttgtct
gaagaggctcgaaaagagctgctggagaggatagcagactgctgcatgcgtcagggcaat
taccacctggccaccaaaaaatacacacaggcgggcaacaagctcaaggccatgagggcg
cttctcaagtcaggtgacacagagaaaattgtattcttcgccactatttctcgtcagaag
gagcttttcatcatggccgccaactacctccagtctctggactggcgaaaaaatccagag
atcttaaagacaatcattggtttctacactaaaggcagggcacccgacctgctggctggc
ttctatgaagcctgtgctcaggtggagattgatgattaccagaactatgaaaaggcttta
gatgctttgactgaggccttcaagtgcctctcaaaagcaaaggactcttcaactggacaa
catgaagtcagactggctgacctgcagcacagagtcacattaataaagaagtttgtcctt
gcacgcagattgtatgctgaggatgctggtgaggcggtgcggttatgtgaagccttgctg
gaggagccggagttggaccctgcagtcaggattggagatgcatttggtttcctggtggag
catcactgtcagcaaggcaactaccaagtggcctaccgtaagctggaggaactccagagg
cttttgcctacgcagaatgtcaggtactatgttagccaggccagcctagaggccctgcag
aaagagttgggtatacccatggagcgtggtgactgcaggcatattgtgaaggaggaagat
gaagtagaggaggacttaaatgtatcttaa
DBGET
integrated database retrieval system
