Plectropomus leopardus (leopard coralgrouper): 121958614
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Entry
121958614 CDS
T07454
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121958614 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121958614 (msh2)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121958614 (msh2)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
121958614
NCBI-ProteinID:
XP_042363593
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Position
19:8696553..8709617
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AA seq
934 aa
AA seq
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MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVRDLLLVRQYRVEVYKNHSKSSKEHDWKLEYKA
SPGNLTQFEEILFGGGTGAVGCAGVVAVRFAMGADGQRVVGVGYVDAAQRTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGESNADGSKLREVVERGGVLVSDRKRAEFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTALDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSQIPALITAL
EKYSGSYQVLLEAVFLSPLRDLQSDFLKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDTLEKSMQAVLNCAARELGLDAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSNLSCLNEEYTKNREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVASFAVASVSAPVPYVRPRLLTDGCRRLELKQARHPCMETDADTAFIPNDITFVQGE
KNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQVKG
VSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISCFCVFA
THFHELTALAAQQPAVHNLHVTALTSQNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKAEELEEFQEPAGEKSEQEEEPEAKRRRTDKQEGENLIEEFLEKAKSLPAATMSE
EEVKATLRKMKRELVAKNNAYVAEILSRVPVKTA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtccatggacagtgcagccgagcatggcttccta
aacttcatcttctccatgccggagaaaccggacactactttcaggatatttgatcgtaac
gactactacaccgttcacggaaaagacgccatattcgcggcgaaggaagttttcaagacg
aatggggtcatcaaatatttgggctcaggcagtcgcaagttggagagtgtggtcctgagc
aagctgaactttgaggcttttgtgagagacttgctgttggtgaggcagtacagagtggaa
gtgtacaaaaatcacagcaagagcagcaaagagcacgactggaagctcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagatcctgtttggcggtgggaccggagccgtg
ggttgtgcaggagtggtagccgtgcggtttgccatgggagcagacggtcagcgggtggtc
ggtgttggctatgtggacgcagcccagaggacgatgggagtgtgcgaattcccggacaat
gagatattctccaacctggagtcccttcttgtccaaatcagccccaaagagtgtctcctg
gctcagggcgaaagcaacgctgacggcagtaaactacgggaggtggtagagcgtggcggc
gtgctggtctctgacaggaagagagcagagttcagtagcaaggacatggtccaggatctc
aacaggctgctgagggccaagagaggagaaactgtggcgagcaacactctgcctgagctg
gacaagcaggtggccatgtcatgcttggctgcggtggtgcgttttcttgaactgctctct
gacgagtccaactttaactccttcagtctgaccgctctggacctgggtcagtacatgagg
ctggacaacgctgccgtgagggctctaaacctgttccagggatcgcccgacgataccagc
ggagctcattcattggccggtttgctaaataagtgtcgtacgccgcagggtcagcggctg
gtcaaccagtggatcaaacaaccactcatggacaaaaccaaaatagaggaaaggttagac
ctggtggagagcttcgtgtgcgactcagagctgagacagacctgtcaggaggacttgctg
cggcggtttcctgatcttcaccgtctggcaaagaagttccaccgtcactctgcgacgctg
caggactgctaccgcgtctaccaggctgtgagccagatccctgccctcatcaccgccctg
gagaaatactcaggtagctaccaggttctgctggaggcggtgttcctctctcctctcaga
gatcttcagtcggacttcctaaagtaccaggagatgattgaaaccactctggacatgaac
cagatcgaccatcacgagttcctggtgaaggcgtcgtttgatccggttttgagtgagctg
agagagaagatggacacgctggagaagagcatgcaggcggtgctgaactgcgctgccagg
gaactaggtctggacgctggtaagacggtgaagctggagtcaaacgccatgctgggcttt
tacctgcgtgtcacctgcaaggaggagaagagtctgaggaacaacaagaaattcaccacg
ctggacgttcagaagaacggagtgcgcttcacaaacagtaacctgagctgcctgaacgag
gagtacaccaagaacagggaggagtacgaggaggcccagaatgccatcgtcaaagagatc
ataaacatcgcttcaggttacgtggatcctctccagactctgagcgatgtgatagcgcag
ctggacgcagtggccagttttgctgtggcatccgtctcggctcccgtgccgtatgttcgt
ccccggctgctgacggacggctgcaggcgtttggagctgaagcaggccagacacccctgc
atggagacggacgcggacactgccttcatacccaacgacatcaccttcgtgcagggagaa
aagaacttctatatcataacaggaccaaacatgggcggcaagtcaactttcatccgtcag
gtgggcgtgatcgctctgatggctcagatcggctgctttgtgccatgtgagaaggcggag
cttagtgtgattgacagcgtcctggccagggtgggagcaggagacagccaggtgaaaggt
gtgtccacctttatgtccgagatgctggagacagctgccatcctgcgctcggccacagag
aactcgctcatcataatcgacgagctcggcagagggacgtccacatatgacggcttcggt
ctggcctgggccatcagcgagcacatcgcctccaaaatcagctgcttctgtgtgtttgcc
acccacttccacgagctgacggcgctggcagcgcagcagcccgccgtccacaacctgcac
gtcacagctctgacctcccaaaacacgctcaccatgctgtacagagtcaaaccgggtgtc
tgcgaccagagttttgggatccacgtggccgagttggcttgcttccctccatcggtggtt
gccatggcgaaggagaaggcggaggagctggaggagttccaggaacctgcaggcgagaag
tcggagcaggaggaagagcctgaggcgaagagacgacggacagacaaacaagagggggaa
aacctgatcgaggagttcctggagaaggcaaagtcgctccctgctgccaccatgagtgag
gaagaggtgaaggcgacgctcaggaagatgaagcgggagcttgtcgccaaaaacaacgcg
tatgtcgcagagatcctttcacgtgttcctgtaaaaacagcttga
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