Plectropomus leopardus (leopard coralgrouper): 121958639
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Entry
121958639 CDS
T07454
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121958639 (vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121958639 (vti1a)
Membrane trafficking [BR:
plep04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
121958639 (vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Sec8_N
BPS1
Laminin_II
LMBR1
CAP59_mtransfer
DUF1664
Motif
Other DBs
NCBI-GeneID:
121958639
NCBI-ProteinID:
XP_042363640
LinkDB
All DBs
Position
19:11817304..11961127
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AA seq
224 aa
AA seq
DB search
MSSDFESYEQDFGTITAEITNKVGRIPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRAMYNSRLKSYKQEVEKLEKDFKRSRIAYSDEVRNELLGDDASSSENQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILSNLHSDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRVLVFILGAIILLTIILAIYFNLRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagactttgaatcttacgagcaggactttgggaccattacagcagaaataacc
aacaaagttggaagaattcccaaactaagcggagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagatccccatccagagccgagccatgtacaacagcagactgaagagctacaagcaggag
gtagagaagctcgagaaagacttcaaaaggtcacgtattgcctacagtgatgaggtgcgc
aacgagctcctgggggatgacgccagctcctctgagaaccagttgataaagttacgtgaa
gagagagcgcatctgttggacaacacagagaagctggaaaggtcatcacggagactggag
gccggctaccagatagcagtagaaactgagcaagtggggcaggagattctttccaacctg
cacagtgaccgtgagaagatccaaagagccagagaaaggctgagagaaacggacgccaac
ctgggcaagagttctcgtatcctcacaggcatgctgagaaggatcatccagaatcgagtc
ctggtcttcatcctcggagccatcatccttctcaccatcatcctggccatctattttaat
ctgcggggccactga
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