Plectropomus leopardus (leopard coralgrouper): 121958714
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Entry
121958714 CDS
T07454
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04080
Neuroactive ligand-receptor interaction
plep04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121958714
04081 Hormone signaling
121958714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121958714
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121958714
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121958714
Nuclear receptors [BR:
plep03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
121958714
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121958714
NCBI-ProteinID:
XP_042363745
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Position
19:4252817..4443518
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AA seq
428 aa
AA seq
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MEHVPKEQDPNPSEGEEKRWLNGPKRKRKNSQCSLKSMTARCLSDSSKSPELKEASKEGY
IPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKI
TRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENRERRKKEEMVKSLQNRPEPTD
SEWEVIHLVTEAHRHTNAQGAQWKQKRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKII
TPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAMRYDPESETLTLSGEMAV
KREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCMDKIEKCQ
ETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFL
EVFEDQEV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgtgcccaaggagcaggaccctaacccatcagagggagaagagaaacggtgg
ctcaatggcccgaaaaggaagaggaagaacagccaatgttcgttgaagagtatgactgct
cgttgtctgagtgacagctccaaatcccccgagctgaaagaagcgagtaaagaagggtac
atccccagctacctcgaaaaggatgagccatgtgtggtgtgtggcgacaaggccacaggt
taccactaccgctgcattacgtgcgagggctgcaagggtttcttccgtaggaccattcaa
aagaacctccaccccagctactcctgtaagtacgatggctgctgcatcatcgacaagatc
acccgcaaccagtgtcagctctgccgcttcaagaagtgcatcgcggtgggcatggccatg
gacttggtgctggatgactcaaagcgggtggctaaacggcgtctgatagaagagaacagg
gagcggcgcaagaaggaggaaatggtgaaatccctccagaaccgtccagaacccaccgac
agcgagtgggaggtgatccacctggtgacggaggcccaccgacacaccaatgctcagggc
gcacagtggaaacagaagcgcaaattcctgccagaaaaaatcggccagtccccggttgcc
cccacgtcagacggagacaaggtggacctggaggccttcagtgagttcaccaagatcatc
actcctgccatcacccgtgtggtcgattttgccaaaaaactgcccatgttctctgagcta
ccttgtgaagaccagatcatcctgttgaagggctgctgcatggagatcatgtccctgcga
gccgccatgcgctacgacccggagagcgagacgctgacgctgagcggcgagatggccgtg
aagcgcgagcagctgaagaacggcgggctgggcgtggtgtcggacgccatcttcgatctg
ggcaagagcctggcacagttcaacctggacgacacggaggtggcgctgttgcaggccgtg
ctgctcatgagctcagatcgttccggcctgacctgcatggacaagatcgagaagtgccag
gagacgtacctgctggcgttcgagcactacatcaactaccgcaagcacaacattcctcac
ttctggccgaagctcctgatgaaggtgacggacctgcggatgatcggggcgtgccacgcc
agccgcttccttcacatgaaggtggagtgtcccaacgaactcttcccgccgctcttcctg
gaggtcttcgaggaccaggaggtgtga
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