Plectropomus leopardus (leopard coralgrouper): 121958795
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Entry
121958795 CDS
T07454
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03430
Mismatch repair
plep03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121958795 (pms2)
03460 Fanconi anemia pathway
121958795 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plep03400
]
121958795 (pms2)
DNA repair and recombination proteins [BR:
plep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
121958795 (pms2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
121958795
NCBI-ProteinID:
XP_042363854
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Position
19:19123426..19129887
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AA seq
868 aa
AA seq
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MSEACSEPAGAIRAIDRHSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVRLKECGA
ELVEVSDNGRGVEEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVV
TCHESSQVGTKLVFDQRGHLVQRSAHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYGR
MLHVLQAYCIISTGVRITCSNQNGQGKRSTVLSTSGSHGMRDNIGAIFGPKQLQSLLPFQ
QVSPSENVLEEYGLKDADLPKQLFAMSGFVSRGDHGVGRSTTDRQFFFINNRPCDPLKVT
KIVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLINMY
EAGVNKISLNVTPIPSKHTPSASLSTKTSSESEVCRVVPSAENVSEPGEDVEAVTQSPKS
SLNLAGLKAAFSSHHSSSSGNKSSTVKSASSGPTQKTLQSFFKGKPSVTSPVKHSRDPAK
GSSVGKSVLDGFRYGRMSNSDADNGAGNDAGNDAGNDADGDADGCDVITTSADVQSFDPE
FSSPDGVENETSENSDSVSVDPESKTEPCTSTEDCPKSPEAKRARTETPPTEHMSSSKVD
APVCEQQRTVDAPVCIQKRTVPLQFSLGELAVKVRRLEELQRQRAGDQLCYRRFRAKISP
GENQSAEEELRKEISKDMFKEMEVIGQFNLGFIIAKLNQDIFMIDQHATDEKYNFEMLQQ
HTVLQGQKLIVPQKLQLTAVSENVLIENIEIFRKNGFEFVIDEDAEVMERVKLVSLPTSK
NWTFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSVSEMKKLLVHM
GQIEHPWNCPHGRPTMRHLANLDILSQD
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcttgcagtgaacctgcaggagccatccgagccatagacaggcactcggtc
catcagatctgctccggtcaggtggtgctgactctggctactgctgtcaaagagctggtg
gagaacagcatcgacgcaggagccacaaacgtcgatgtgaggctgaaggagtgtggagct
gaactggtggaagtgtcagacaacggcagaggagttgaagaggccaactttgagggactg
acattgaagcatcacacgtcgaagctgagggatttctccgatctcatccacgtggaaaca
tttggcttcagaggtgaagccctcagctctctgtgtgctctcagtgacctgagtgtggtg
acgtgccatgagtccagccaggtgggcaccaagctggtgtttgaccaaagaggtcacctg
gtgcagcggtcggcccatccccgtcagcagggcaccacggtcagcctgcagcagctcttc
tacactctgcctgtccgacacaaagagttccagcgcaacatcaagaaggagtacggcagg
atgctccacgtgcttcaggcgtactgtatcatctccacaggagtgagaatcacctgctcc
aatcagaacgggcagggcaaacgcagcacggtgctcagcaccagcggcagccacggcatg
agagacaacattggggccatattcggaccaaaacagctgcagagtctgctgccgttccaa
caggtgtctccttcagagaacgttctagaagaatatggactcaaagatgcagatctgccc
aaacagctcttcgccatgtcagggttcgtgtcccgaggagaccacggagttgggaggagc
accacagacagacagttcttcttcatcaacaaccgaccctgtgatccactcaaggtgacc
aaaattgtgaatgaagtgtatcacatgtacaacagacaccagtatccatttgtggccctg
aacatcgctgtggcctctgagtgtgtggatgtgaacgtgactccggacaaacgtcagatt
ttccttcaggaggagaaactcctgttggcgattctaaagacgtctctcatcaacatgtac
gaggccggagtcaataagatcagcttaaacgtcacacccatccccagcaaacacacgccc
agcgccagcctcagcaccaaaacatcgtcagagtctgaagtctgtcgggttgtcccctct
gctgagaacgtgtcagaacctggagaggacgtggaagcagtgactcagagtccaaagtca
tctctcaatctagccggcctcaaagctgccttttcaagtcaccacagctccagttcaggg
aacaagtcaagcacggtgaaatctgccagcagcggcccgactcagaaaacactgcagagt
ttctttaagggaaaaccgagtgtcacatctcctgtgaaacacagcagagatccagctaaa
ggctcctcggtgggaaagtctgtgctcgatgggttcaggtatgggaggatgtcaaacagt
gatgcagacaatggtgcaggcaatgatgcaggcaatgatgcaggcaatgatgcagacggt
gatgcagacggctgcgatgtcattacgacatcagcagatgttcagagttttgacccagag
ttcagctctcctgatggtgtggaaaatgaaacatcagagaacagtgacagtgtttctgtg
gacccagagtcaaagactgagccatgcacgtccactgaggactgtcctaagagtcctgaa
gccaaaagggcccggacagagacgccaccgacagaacacatgtcctcctccaaggtggac
gctccggtgtgtgaacagcagaggacggtggacgctccagtctgcatacagaagaggacg
gtgcctctgcagttctctttaggagagctggctgtgaaggtaaggaggttagaggagctg
cagagacagagagctggtgaccagctgtgctaccgacgcttcagagccaagatcagcccc
ggagagaaccagagcgcagaggaggagctcaggaaggagatcagcaaagacatgttcaaa
gagatggaggtcatcggacagtttaacctcggcttcatcatcgccaaactcaaccaggac
atcttcatgatcgaccagcacgccacagatgagaaatacaactttgagatgctgcagcag
cacaccgtgctccagggacagaaactcatcgttcctcagaagctgcagctgaccgccgtc
agcgaaaacgtgttgatagagaatatcgagatcttcagaaaaaacggctttgagttcgtc
attgatgaggacgcggaggtgatggagagggttaaactggtttcgctgcccaccagtaag
aactggacgtttggtcctgcagacatcgaggagctgatcttcatgctgagcgacagcccg
ggggtcatgtgtcgaccgtcgcgagtccggcagatgtttgcctccagagcctgtcgcaaa
tctgtgatgattggtactgctctgagtgtcagtgagatgaagaagctcctggttcacatg
ggacagatcgaacatccgtggaactgtcctcatggccgtcccaccatgagacacctcgcc
aacctggacatcctctcacaggactga
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