Plectropomus leopardus (leopard coralgrouper): 121958863
Help
Entry
121958863 CDS
T07454
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plep04121
]
121958863 (rnf40)
Enzymes [BR:
plep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121958863 (rnf40)
Ubiquitin system [BR:
plep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
121958863 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
ADIP
zf-RING_2
zf-RING_5
OVT1
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
121958863
NCBI-ProteinID:
XP_042363957
LinkDB
All DBs
Position
19:17479240..17496368
Genome browser
AA seq
1006 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVQVLRKRIEPEAPV
TSSHAPPAPPLPEPTPMEEDGVSLASPTSAAPPPPLPEAQNEGEQAEQQQQQQEEHQEDR
QEEQKQPPPPAGSEELLTPTEPPPDSATDPSPPPAPLSENAKSFLTTLEHSSEEELTLHL
QDRMQFSKEAIACLVCVFDRLHSRIDLMCKQVQAAACEDDSQSEIINVNHTLLDENSRLR
DLATLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDMEKLRNREQKLNKHLA
EAMEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQ
EAVRESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKN
AHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINR
EMRHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLIIEESTSDSIDVK
KEEDEDQEEEEERRKELERQRAREREREREAERERERERERERQRSDELKRKDSDTLKML
RVELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERER
KESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRL
LQQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKE
GVLQSTLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENR
TARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRD
KETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtccctcaggaggggacagcccccctggcccacct
gagaagaaaagcaaaaaagaggagaagaccaccaccactctcattgagcccatacgcatt
gctggagtctcctctacagaggaaatggacatgaaggtcctccagttcaagaataagaag
ctgtgtgagcggctggagcagagacagacgatggaggatgagttacgagagaaaattgag
aagttggagaagagacaggctactgatgacactaccttgctgattgtcaaccgttactgg
tcacagttggaagagaatgtgcaagttcttcgcaaacgtattgagccagaggctccagtg
acatcttctcatgctccgcctgcgccccctcttcctgaacctacgccaatggaggaagat
ggtgtcagtctggcttcaccaacttctgccgcgcctccaccgccacttccagaggctcag
aacgaaggggagcaggcagagcagcagcaacagcagcaggaggagcatcaggaagatcgt
caggaagagcagaagcagccccctcctcctgctggctcggaagagttgctgacacccaca
gagccaccaccggactcagcaacagatccatcgccgccccctgcgcctctaagtgagaat
gccaagtctttcctgactacactggagcacagcagtgaggaggagctcaccctgcacctc
caagaccgcatgcagttcagcaaggaagctattgcctgcttagtctgcgtctttgacagg
ctgcacagccgcatcgacctcatgtgcaagcaagtccaagctgcagcatgtgaggacgat
agccagtcagaaatcatcaatgtgaatcatactctgctggacgagaacagtcgactgcga
gacctcgccacgcttctccagggtcgacatcacaaaatgtccatggagtacaatgagtta
gtggacaaggtgaccagctccgagaccaaggtgtctgagatggagacgacggtggaagac
ctacagtgggacatggagaaactccgcaatagagaacaaaagctcaacaaacatctggct
gaagccatggagcagctgaagtctggatacagcagcaccggcagctcaggtggactaccg
ggaggccagataacactgaacattcagaagtttgaaagtctaaatgcagagttggagcac
aatcaggagttggctaatagtcgtatggcagagttggagaaactgcaggtggagctccag
gaggctgtgagggagagcgagaagctcaagatggatttgaggaatattccagaagaggtt
gtgaaggagactctagagtacaaatgtctgcagtcccagttctccctgctgtacaatgag
tcccttggggtgaaaacccagctggatgaggcacgagccctcctgctcactgccaagaac
gcccatctgcgacagattgagcacatggagagtgatgagctgtcccttcagaagaagctg
cggactgaagtcatccagctggaggacaccctggcccaggtgcgcaaagagtatgagatg
ctgcgcattgagtttgagcagaacctggcagccaacgagcaagcaggaccaatcaacagg
gagatgcgacacttaatcagcagtcttcagaaccacaacttgcagttgaaaggtgatgta
cagcgctataagaggaagttgcgggaaacacagatggagatcaataagttgcgctgtcag
agtggtgacacaggggttctgattatagaggagtccacgagtgacagcattgatgtgaag
aaagaggaggatgaggaccaggaggaggaggaggagaggagaaaggagctggagagacag
cgggcccgggagagagagagagagagggaggctgagagagaacgagagagggagcgggag
agagagaggcagcgcagcgacgagctgaagaggaaggactcagacacactgaagatgctc
agagtagaactcaaaaaagcccaggagtcccagaaagagatgaagctcttgttggacatg
tacaagtcagctccaaaggagcagcgggacaaagtgcagcttatggcagctgaacgtaaa
tctaaagctgaggtggatgagttgaggatgcgagtgcgagagctggaagagagggagagg
aaggaaagcaagaagctagctgatgaagacgccctccggaagatccgagtggcagaagag
accattgagcatctgcaaaagaaactcgctgccaccaaacaggaggaggaggccttgctg
agtgagatggatgtaacaggccaggccttcgaggacatgcaggagcagaacagccgcttg
ttgcagcagttacgggagaaggatgacgccaatttcaagctgatgagtgagcgtatcaaa
tctaaccagatctacaagttgctgaaagaggagaaggaggagttagctgaccaagttctc
acattcaaaacccaggtggatgcccagctgctggttgtgcagaaactagaggaaaaagag
ggcgtcctccagagcacacttgcagctctagaaaaggagctggctgtccggactcaagca
ttagaactcaacaagaggaaggcggtggaggctgcccagctggcagaggacctgaaggtg
cagctggagcacacgcaggccaagcttaaggagatccaggtctctgtggctgagaaccgc
accgcccgggagagggagagcagcaacctgaaacgagcacaggaggatctgtcgaggctg
agaaggaagctggagaaacagaagaaggtggaggtgtactctgatgctgatgagatcctg
caggaggagatcaaccagtacaaggccaagctgcgctgcccctgctgcaacacacgagac
aaggagacggtgctcacaaagtgtttccacgtattctgctacgaatgtctgaagatgcgt
tacgatacccggcagaggaagtgccccaagtgcaactgcgccttcggagccaacgacttt
caccgcatctacatcacttaa
DBGET
integrated database retrieval system
