Plectropomus leopardus (leopard coralgrouper): 121959156
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Entry
121959156 CDS
T07454
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121959156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plep04040
]
121959156
Ion channels [BR:
plep04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121959156
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
121959156
NCBI-ProteinID:
XP_042364288
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Position
19:11172840..11284284
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AA seq
1219 aa
AA seq
DB search
MSKRDKFNPDPSIHISKMNVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILLWR
TLKYLWTVCCHCNAKKKEVHRITTGDGIKRTDKDDPAASEVGWMTSVKDWAGVMISAQTL
TGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIA
ANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTS
NSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVGY
GDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGH
ITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHD
LARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLL
NIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLE
GVANEMYTEYLSSAFVGMSFPVICELCYVKLKLLLIAIEYKSDQRECSTLINPGNHVKMQ
EGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYSKNSYNGYIKSIEED
QQSALSPKKKQRNGGMRNSPNSSPKIMRHDPLLIPGNEQIESMDENVKKYDSTGMFHWCP
SKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVF
VGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQ
DKECILASLNIKSMLFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGANI
PIITELAPLAKPGKKPPVISFSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYL
TQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYST
PQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQ
SQCTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHS
IPTTNRTNRAKSRDSRDKQNATRMNRVGQEKTWFTDEPEKSLLRTIQIKPVNTLTINQVS
QCKSTCSLIPPIREAEDEC
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagggataaattcaacccggatccgtccatccacatatccaagatgaatgtc
atcatcccattctcgccagatgtgccctgtgacagcaacggccagcggatgtggtgggct
ttcctcgcctcctccatggtcactttctttgggggtctcttcatcatcctgctgtggagg
actctcaaatacctgtggacggtgtgctgccactgtaacgccaagaagaaggaggtccat
cggatcaccacaggcgatggcatcaaacgcaccgacaaggacgacccagcggccagcgag
gtgggctggatgacctcggtcaaagactgggccggagtcatgatatcagctcagacactg
acaggaagagtcctggtggtgctcgtgtttgctctcagcatcggagcccttgttatatac
ttcatagattcttctgatccgatcgagtcctgccagaacttctacaaagacttcacgttg
cagatcgacatggcattcaacgtgttcttcctgctgtacttcggcctccgtttcattgct
gccaatgacaagctgtggttctggttggaggtgaactcggtggtggacttcttcacggtt
cctccggtgtttgtgtcggtgtacctgaataggagctggctcggcttgaggtttttaagg
gccttaaggttgatacagttctcagaaattttacagtttttgaatatactaaagacaagc
aactcaataaagctggtgaacctgtgttcaatcttcataagcacatggctaaccgcagca
ggattcattcatttggtggagaactcaggggatccttgggaaaacttccaaaattcccag
gcactttcctattgggaatgtgtctacttactcatggttactatgtccactgttggctat
ggagatgtttatgccaaaaccaccctgggccgcctgtttatggtcttcttcatccttggt
ggtttggccatgtttgcgagctacgtccctgaaatcatagagttaataggaaaccgcaag
aaatatggtggttcctatagtgcggttaatgggagaaagcacatcgtggtttgtggccat
ataacacttgagagcgtgtccaactttctaaaagacttcctacacaaggacagggatgat
gtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagccttg
ttcaagcgtcacttcactcaggtggagttttaccaagggtctgtcctgaacccacacgac
ctggccagagtcaagattgaatcagctgatgcctgtttgatattagccaacaaatactgc
gctgaccctgatgctgaggatgcatccaacatcatgagagtaatatcgatcaagaactac
catccaaagatccgaataatcactcaaatgttgcagtaccacaataaggcccaccttctg
aacatcccaagctggaactggaaagagggagatgatgcgatttgccttgcggagctgaag
ctgggcttcatcgctcagagctgcctggctcagggcctgtccaccatgctggccaacctt
ttctccatgaggtccttcatcaagattgaagaggacacgtggcagaagtattaccttgaa
ggagtcgccaatgagatgtacacagagtacctgtcgagtgcctttgtgggcatgtccttc
cctgttatttgcgaactctgctatgtgaagctaaagctgctgctgatagctatagagtac
aagtctgatcaaagggaatgcagcaccctgataaaccctggaaaccacgtgaaaatgcag
gaggggacattgggcttcttcattgccagcgatgccaaagaagtaaagagggcgctgttt
tactgtaaagcctgccacgatgacatcactgaccccaaaaggataaagaaatgtggatgc
aagaaattgatatattctaaaaatagctataatggatatatcaaatcaattgaagaggac
caacagtcggccttgtcgcctaaaaagaagcaacgtaatggaggcatgagaaattctccc
aactcatcacctaaaataatgagacatgacccgctcctcatcccggggaacgagcagatt
gagagcatggacgagaacgtaaagaaatacgactccacagggatgtttcactggtgcccg
tccaaagacatcgagaaggtcatcttgacccgcagtgaggcagccatgactgttctgagc
ggtcacgtggtcgtgtgcatattcggagatgtgaaatcagcgttgattggcctccgtaac
tttgtcatgcctttgagagcgagcaactttcactaccacgagctgaagcacatcgtgttc
gttggctcacttgagtatctgaagagggagtgggaaactcttcacaactttccaaaggtc
tccattttacctggcacaccgttgagtcgggcagatttgagggctgtcaacatcaacctc
tgcgacatgtgtgtcatcctgtcagccaatcagaacaatattgacgatgcatcactgcag
gacaaagaatgcatcttggcgtcactcaacatcaaatccatgctgtttgacgacagcatc
ggggtcttgcaggctaattcccaaggcttcacaccaccagggatggatagatcgtctcct
gaaaacagccctgtccatggattagtgaggcagacgtctgtcacaactggagcaaatatc
cccatcataacagaactagcaccattagcaaagccaggcaaaaaaccgcctgtgatttca
ttcagtcaggataaaagcagtgggaccagcatacaaatgataactgagctggtgaatgat
tcgaacgttcagttcctggaccaagatgacgacgacgaccctgacacagagttatacctc
acccagccttttgcctgcgggacagcctttgccgtcagtgtgctggattccttaatgagt
gctacatacttcaatgataatatcctcaccttgatccggacgttggtaacaggcggggcg
acgccggagctggaggggctgctggcagaggagaatgcattacgtggcggctacagcacg
ccacagacgctggcgaacagggacaggtgtcgcgtggcacagctggccttgtacgacggg
cccttcgccgacctcggggatggtggctgttatggtgacctgttttgtaaagccctgaaa
acgtacaatatgttgtgctttggcatctatcggttacgagatgctcatctaaacacacaa
agccaatgcaccaaacggtatgtcataaccaatccaccatatgcgtttgagctggtgccc
tcagacctgatattctgcctgatgcagtttgaccacaacgctggccagtctcgaaccagc
ctttcccactcctcccattcgtcccattcctccagcaaaaagagctcctccgtccactct
atcccaaccaccaaccgcaccaaccgcgccaaaagcagggactcaagagacaaacaaaat
gcaacaaggatgaatagagtgggccaagaaaagacatggtttacagatgagccagagaaa
tccctcctgaggaccatacagatcaagcctgtgaatacgctcaccatcaaccaagtcagt
cagtgtaaatccacatgcagcttgatcccacccatcagagaagcagaagacgagtgctga
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