Plectropomus leopardus (leopard coralgrouper): 121959525
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Entry
121959525 CDS
T07454
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03320
PPAR signaling pathway
plep04148
Efferocytosis
plep04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121959525 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121959525 (rxraa)
03320 PPAR signaling pathway
121959525 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plep03000
]
121959525 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plep03310
]
121959525 (rxraa)
Transcription factors [BR:
plep03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121959525 (rxraa)
Nuclear receptors [BR:
plep03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121959525 (rxraa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
121959525
NCBI-ProteinID:
XP_042364810
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Position
20:21893612..22023894
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AA seq
504 aa
AA seq
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METKPFLSLGFLKPQCSLAPPMQRGRSGEACSCFSGMCPLHQRRLSSDSSGQVPSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMNSPGMGY
GPSVSPQMFQLNSPMNSVSSTEDIKPPLGINGVMKVPAQPSGTVLSLTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKRE
VLLHAAVQEERQRAKDRNENEVESTSCANEDMPVEKILEAEQAVEPKTETYIETNLGVPS
NSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSI
AIKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNP
DSKGLSNPSEVEALREKVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcttgtcattggggttcctgaagccccagtgctcgttggctccc
cccatgcagcgaggtcgctcgggtgaggcatgttcctgtttcagcggcatgtgtcccctc
caccagcgtcgcctatcctcagactcgtcaggccaggtgccctcgtcgcccctgggctca
cccacatcccaccggggaatgcacccatctctgctcagcccgacgtcaatggggccctcc
ggctccctccactctcccatcagcacactgagttcgcccatgaacggcctggcctcaccc
ttctccgtcatcagctctcccatgggcccccactccatgaactcgcccggcatgggctat
ggcccgagcgtcagcccccagatgttccagctaaattctccgatgaactcggtcagcagt
acggaggacatcaagcccccgctgggaatcaacggtgtgatgaaggtgcccgcccagccc
tcaggcacagtcctgtcgctcaccaaacacatctgcgccatctgtggtgaccgctcctca
ggtaaacactatggggtatacagctgtgagggctgcaaaggttttttcaaaaggacggtg
cgcaaagacctgacctacacctgccgtgacaacaaggactgcgtcatcgataagcgccag
aggaaccgctgccagtactgccgctaccagaagtgtttagccatgggcatgaagagagaa
gttttgttacatgcagccgttcaggaggagcgccagcgagccaaggacagaaatgagaac
gaggtggagtccaccagctgcgccaacgaggacatgcccgtggagaagatcctggaggcc
gagcaggcggtggaacccaaaactgagacctacattgagaccaaccttggtgtgccatcc
aactcgccgaacgacccggtgacaaatatctgtcaggcggctgacaaacagctctttacc
ctggtggagtgggccaagaggatcccacacttctctgagctgccgctggacgaccaggtc
atccttctacgagcaggttggaatgaactcctcattgcatcattctcacaccgttcgata
gcgattaaagatgggatcctgttggcgacggggctgcacgtccaccgcaacagcgcccat
agtgccggagtgggagccatctttgacagagtgctcacagaactggtgtcaaagatgagg
gacatgcagatggataagacagaactggggtgccttcgagctatagtccttttcaaccca
gactctaaaggtctgtccaacccaagtgaggtagaagctctgagagagaaagtgtatgca
tctttagaggcctactgcaaacagaagtacccagaccagcctggcagatttgctaaactg
ttgctgcggttaccagcgctgcgttccatcggcctcaagtgtctggagcacttgttcttc
ttcaagctcattggcgacacgcccattgacacgttcctcatggagatgttagaagccccg
catcaaatgacataa
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