Plectropomus leopardus (leopard coralgrouper): 121959545
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Entry
121959545 CDS
T07454
Symbol
vldlr
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121959545 (vldlr)
Membrane trafficking [BR:
plep04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121959545 (vldlr)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
121959545
NCBI-ProteinID:
XP_042364845
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All DBs
Position
20:24908529..24977392
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AA seq
907 aa
AA seq
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MCGLRVNRRNQRRSRPARASEDGRQAGQRGSRERSASKPYVTLREMVTSTPGILLLPMLI
CLQHCVNVHGTKTECEANQFQCGNGRCIPSVWQCDGDEDCTDGSDENSCVRKTCVEVDFV
CRNGQCVPKRWHCDGEPDCEDGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCDGEK
DCDNGEDEVNCGNITCAPNEFTCASGRCISRNFVCNGEDDCGDGSDEVECAPSSCGPSEF
QCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSTEMQCRSGECIHKKWRC
DGDPDCKDGSDEANCPVRTCGPDQFKCDDGNCITGSRQCNGLRDCADGSDEVNCKNMTQC
NGPEKFKCRSGDCIEMSKVCNKARDCPDWSDEPIQECNLNECLLNNGGCSHICKDMVIGF
ECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG
KEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQQMIFWADLGQRAIYSTVL
DKRGDVGTHNKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVANFNGTKQKVLFNRGLK
EPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVMTDIQWPNGITLDLIKGRLYW
VDSKLHMLCSVDLNGDNRKKVLQSPDYLAHPFALTVFEDRVFWTDGENEAIYGANKFTGS
DVVTLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLPAPQINKHSPKYTCVC
PEGQELAADGLRCRPDHQGSSKDDGKALIQPPQEANVSTSIQVNSTARGSAAAWAILPVL
LLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDITRHGANVGHTYPAISIV
STDDDLS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggtttgcgcgtgaaccggcggaatcaaagaagaagcaggccagcgcgagccagc
gaggacggcaggcaggcagggcagagaggcagccgcgagcgctcagctagcaaaccgtac
gttacactgcgagagatggtcacgtccacaccggggatccttctgctgccgatgctaata
tgtctccagcactgcgttaacgtccacggtacaaagacagaatgtgaagccaaccagttt
cagtgtggaaatggtcgctgcatcccgtctgtctggcagtgtgacggagatgaggactgc
accgacggcagcgacgagaactcctgtgttagaaagacttgtgtggaggtggactttgtg
tgtcgcaatggccaatgtgtcccgaagagatggcactgtgatggagagccggactgcgag
gacgggtccgacgagagcgtcgaaatctgccacatgaggacgtgtcgtgtgaacgagttc
agctgcggagcgggctcaactcagtgtatccccatcttctggaaatgtgacggagaaaag
gactgtgacaacggagaggacgaggtcaactgtggtaatatcacctgtgccccaaacgaa
tttacatgcgccagcggccgctgcatctcccgcaactttgtgtgtaatggtgaggacgac
tgtggcgacggctctgatgaggtggagtgtgcgccctcctcctgcggccccagcgagttc
caatgtggaaactcatcgtgcatcccggccagctgggtgtgtgatgatgatgtcgactgc
caggaccagtcagatgagtctccgtctcgttgcggccgtcacccgacgccgcctgccaag
tgttcgtccactgagatgcagtgccgctcaggggaatgtattcacaagaagtggaggtgt
gatggagaccctgactgcaaggatggcagcgatgaagccaactgtcctgtacgcacttgt
ggaccagatcagttcaaatgtgatgatggaaactgtatcacgggcagcagacagtgtaac
ggcctcagagactgcgccgatggatcagacgaagtcaactgcaaaaacatgacgcagtgc
aacggaccagagaagttcaagtgtcgcagcggggattgtatcgagatgagcaaagtgtgt
aacaaggcccgagactgtcccgactggagcgacgaacccattcaggaatgcaatctaaac
gagtgtctcctgaacaatggcggctgctctcacatctgcaaagacatggtgattggcttc
gagtgtgactgcacacctggactccagctcatagaccacaagacctgcggagacatcaat
gagtgtttaaaccccggcatctgcagtcagatctgcatcaacctgaaaggcgggtacaag
tgtgaatgccacaacggctaccagatggatccgaccaccggcgtctgcaaggctgtcggt
aaggagccctgcctgatcttcactaaccgccgggacatccgtcgtctgggcctggagagg
aaggagtacacgcagattgtggagcagcagaggaacacagtggctctggacgcagacttt
gaccagcagatgatcttctgggctgacctgggccagagggccatttatagcactgtgctg
gacaaacgaggggacgtcggcacgcacaacaaagtgatcgacaacgtccagacccctgtg
ggaatcgctgtagactggatctataagaacttgtactggtctgatctcagcaccaaaacc
atttctgtagccaacttcaacggaaccaagcagaaagttttgttcaacagaggcctcaaa
gagccggcatccatcgccgtggatccgctgtctgggtttttatactggtctgactggggc
gagcctgctaagattgagaaatccggcatgaacggagtggacagacaggttctggtcatg
acggacatccagtggcctaatggaatcacgctagatctaatcaaaggcaggttgtactgg
gtcgactctaagctgcacatgctctgtagcgtcgacctgaacggagacaacaggaagaaa
gtgctccagtctccagactacttggctcatcctttcgctctcactgtgtttgaggatcga
gtcttttggacggatggcgaaaatgaagccatctatggtgcaaacaagttcacaggttct
gacgtggtaacgctggccagcaacctgaatgacccccaggacatcatcgtgtaccacgag
ctgatccagctgtcaggtacgaactggtgtgcagagaaaggtgaaaatggaggctgcagc
tacatgtgtctgcctgcaccgcaaatcaacaaacattcccccaaatacacttgcgtgtgt
ccagagggacaggagctggctgctgacggcttacgctgcagacctgaccaccaaggttcc
tcaaaggatgatgggaaagctctaatacagccaccccaagaagccaacgtgagcacgtcg
atccaggtgaactccacagccagagggtcagctgctgcctgggccatactgcctgtcttg
ctgctggcgatggcggcggcaggcggctacctgatgtggagaaactggcagctgaagaac
cagaagagcatgaactttgacaaccctgtctacctgaagaccaccgaagaagacctcaac
atcgacatcacccgacacggcgccaacgtgggccacacctaccctgcgatttctatagtg
agcacagatgacgatttatcatga
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