Plectropomus leopardus (leopard coralgrouper): 121959546
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Entry
121959546 CDS
T07454
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121959546
03041 Spliceosome [BR:
plep03041
]
121959546
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121959546
Spliceosome [BR:
plep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121959546
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121959546
NCBI-ProteinID:
XP_042364846
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Position
20:4214378..4228566
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AA seq
387 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NESTNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYGNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGG
MVEPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccaacccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccagattggaccttgcaagagctgcaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacaccaaccagccaaaagaaagacacaagcagtcacttccatgtttttgttgga
gatctaagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatccagcagatgggaggacagtgg
ttgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcccaaaactaca
aatgaatcaaccaataccaagcagctgtcctttgatgaggtggtcaaccagtccagcccg
agcaactgcaccgtctactgcgggggagtcaccacaggtctcacagagcaaattatgaga
cagaccttctcacctttcggacaaataatggaaatccgcgttttcccggacaaaggctac
tcatttgtgaggttcaactcccatgaagcagcagctcacgccattgtgtctgtcaatggc
acctccatagagggctatgttgttaagtgttactggggcaaagaaacaacagacatggtc
agccccatacagcaggtacagatgccacagcagaacacggtgagcttcgcagcgcagccc
tacagccagtggggtcagtggtacggcaacacagctgcacagcagattggtcagtacgtg
cccaatggatggcaggtgccgagctacggagtctacggacagacctgggatcagcaaggc
tacaatcatttacatgctggtgccggatggacaggcgtgggcgccgtgagcaacggaggc
atggtggagcccgggcagggcgtcaacgggacagtgctaaccaaccaggccggcatgagc
actgctggctaccacacccactga
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