Plectropomus leopardus (leopard coralgrouper): 121959899
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Entry
121959899 CDS
T07454
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121959899 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121959899 (exosc2)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121959899 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121959899 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
121959899
NCBI-ProteinID:
XP_042365369
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All DBs
Position
20:complement(13599100..13603609)
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AA seq
293 aa
AA seq
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MAADMRLPTIQKPVSLSVSAFNRKDLVVPGDVITSDTGFMRGHGTYVDEEKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETSSRLDSVLLLSSVNLPGGEL
RRRSTKDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEKEEGEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcaaaaaccagtgtcgctctcagtttctgct
tttaaccgaaaggatctggttgtccccggagatgttatcacatcagacaccggcttcatg
aggggccatggtacctatgttgatgaagagaagctgacagcttcagttgctggagaagtg
cagagagtagacaagctgatctgtgtcagaccacttaagacaaggtttaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtacaacagaaacggtggaaggtggagacc
agctcccgactggactctgtcctcttgttgtcttctgtcaatctgccaggtggagagctg
aggagaaggtcaacaaaggacgaactcaccatgagagaataccttcaggaaggcgatctc
atcagtgccgaggtgcagtccgtcttctcggatggagccctatcgttgcacactcgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtgcagctttctccttctctgatcaag
aggcagaaaacacatttccacaacctgccgtgtggtgcatccatcatcctcgggaataac
ggctttgtgtggttgtatcccacaccggaaaaagaggagggggaggctggaggattttac
accagcctggagcctgtcagtctgtcagatcgagaggtgatttcacgtttgagaaactgc
ctgctggctttggctgcacacaaggtccttttgtatgacaccagcgttctctattgctat
gaatcttcagtccaacaccaggtcaaagacatcttgaaaccagaagtgatggaggagatt
gtgatgttgacgcaacagaagctgctggaacaggagggttaa
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