Plectropomus leopardus (leopard coralgrouper): 121959903
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Entry
121959903 CDS
T07454
Symbol
chd5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plep03036
]
121959903 (chd5)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121959903 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
121959903
NCBI-ProteinID:
XP_042365378
LinkDB
All DBs
Position
2:complement(34308788..34366366)
Genome browser
AA seq
1999 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERNTVPLTPLDIFSDNDSLKQQKKKKPKKMKE
GKMPKVKKRKKEGGIQPRVDSDLEETSEVEEERERPEIGSESESSAYGPTKKKKKKPKEK
KEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSSSQPSSQLGPIKKAKTKEGKGPGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWTWGEPPLPAELPAGPDGKPNDPLTKPPLKGHPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYGI
KPEWMVIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYDGHKASYWDHREQ
ILGEDQRPLVVRKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDNAVKQGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKEGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNHSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPIATQPGTPVPPEKTESLLGPAEDKET
TEQDSKKPSEQESSSAEPASAPEKAADGEESKASSEEKTGDERDTTESPSAKTEPSANSK
ELALKQTELSSSQTSPKTEPCKETEKGDSDSPQAKTEDKENKPAVADDMKSEDALEGRLN
GDKDTLDEMDESRKEDKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHRR
HDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQA
LVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHK
VLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFSQG
GFGCSQMYSSSFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLDSLRD
VATPDLKSGKPSDVICIED
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaagacgacatggattttgaagacgat
atgccagatgaggatgacgaaggtgagcgcaacactgttcccctcactccccttgacatc
ttttctgacaacgactccctcaaacaacaaaagaagaagaagcccaaaaagatgaaagag
gggaaaatgcccaaagttaagaagaggaaaaaggagggaggaatccagccaagagttgac
agcgacctggaggagacctcagaggtggaggaggaaagggaacggccagaaataggctca
gagagtgagagcagcgcgtatggtccaaccaaaaagaagaaaaagaaaccgaaggagaag
aaagagaagaagcccaggaagaagaagagagatgaggaagatgacgatgatgacgatgat
gatgggaacatgaaagaacccaaatcatccagccagttgatgcaggagtggggtctggaa
gacgttcagtatggcttcaccgaggacgactacaaaaccatcacaaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgagagttcagtgccaacaacccgttcaaaggcgca
tctgccaccgctgtggctgccgctgtggctgccgccgtggaaacagttaccgtggcacag
ccgacatctgtcagcagcagccagccgagctctcagctggggccaatcaaaaaagccaaa
accaaagagggaaagggaccaggagtaaggaagagaagcaagactgtgaaggaggtgaag
aagaaacccaagccgaagaagaccaaatcaaagtcgggccagagtgggaagaagaagaaa
gcatcctcgagcgaggaggacttcctggaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaagatggtgacggttatgagacagaccaccaggactactgt
gaggtttgccagcagggtggagagattatcctgtgtgacacctgtcccagagcgtaccac
ctggtctgtctggacccagagctggagaaggcccctgagggcaaatggagttgtccacac
tgtgagaaagagggcatccagtgggaagccaaagatgaggaggaagaggaggaggagcca
gcaggcgaggaagaggacgaccacatggagttttgccgagtgtgtaaagatggaggagag
ctgctgtgttgtgacacctgcccatcttcctaccacatccactgcctcaacccgcctctc
cccgagatacccaacggggagtggttgtgtccacgctgcatgtgtcctcccctcaaaggt
aaggtccaaaagattctgcactggacatggggagagcccccgttgccagctgaactgccc
gcaggccccgacggcaagccaaatgatccactgaccaagcctccgctcaagggccaccca
gagagggagttcttcgtaaagtgggctggcctttcgtactggcactgctcctgggtcagc
gagctgcagttggagctgtaccataccgtcatgtatcggaactaccagcgcaagaacgac
atggacgaacctccgccgtacgactacggctccggagaggaggagctcaacagcgagaag
aggaagagcaaagacccccagtatgctgtgatggaggagcgcttctaccgctatggcatc
aaaccagagtggatggttatccaccggatactcaaccacagctttgataaggatggcgat
gtgcattacctgatcaagtggagagatctgccctacgaccagtgcacttgggaggtcgac
gactttgacgtcccagaatatgacggtcataaagcttcgtactgggaccacagggaacaa
atactgggggaggaccaacgccccctggtggtgaggaaaggaaagaaactcaaagacgac
catccaaagagggaggtcccccctgatgctcccatcatagacccaaccatcaagtttgaa
caccagccgtggtacattaacgccaccgggggaacgctgcacccgtaccagctggaaggc
ctgaactggttgaggttctcctgggcgcagggcactgacaccatcctggctgatgagatg
ggcctcggaaagacggtgcagacgatagtgtttctctactctctctataaggagggtcac
tcgaaggggccgttcttggtgagtgcgcccctctccactataatcaactgggagcgggaa
tttgagatgtgggctccagatttctacgtggtgacttacactggagacaaagacagccgg
gcgatcatcagggagaatgagttcacctttgaagacaatgctgtgaaacagggacgcaag
gtgtttcgcatgaagaaagacactcccatcaagttccacgtgctgctgacctcctatgag
ctgatcactatagatcaagccatcctgggctccatcacatgggcctgcctggtggtagac
gaggcccaccgactgaagaacaaccaatcaaagtttttcagaatcctcaacgggtataag
atctactacaagctgctgctcactgggactcctctacagaacaacctggaagagctgttc
cacctgcttaacttcctcacccccgagcgcttcaataacctggatggcttcctggaggag
tttgctgatatctctaaggaggaccagatcaagaagctgcacgacctgctcggccctcat
atgctcagaaggctgaaagccgacgtcttcaagaacatgcctgcaaagacagagttgatt
gtgcgagtggagctcagccccatgcagaagaaatattacaagtttattttgacgcggaat
ttcgaggctctgaactccaaaggtggagggaaccaggtgtccctgctcaacattatgatg
gacctgaagaagtgctgcaaccatccctacctgttccctgtggctgctgtggaagctcct
gtattacccaacggctcatatgatggcaacctgctggtgaagtcctcaggaaaactgacg
ctgcttcaaaaaatgctgaagaaactgaaagatgaaggacacagagttctcattttctct
cagatgacaaagatgttggatctacttgaggattttctggagtttgaaggttataaatat
gagcgtattgatggaggaattactggaggcctcaggcaggaggccattgaccgcttcaat
gcaccgggcgctcagcagttctgcttcttgctttcaacaagagctggaggtcttggcatc
aacctggcgagcgcagacactgtcatcatctacgactcggactggaatcctcacaatgac
atccaagcttttagcagagctcatcgtatcggccaaaacaggaaggtgatgatctatcgt
ttcgtgacgcgaggctcagtggaggagcgaatcactcaggtggcaaagaggaagatgatg
ctgacccacctggtggtgcggcccggcctgggctccaaaactggctccatgtccaaacaa
gaactggacgatatcctaaagtttggcacggaggagcttttcaaagatgaaatggaagca
gcacgaactatgggtgacaacaaggagggtgaggagggcaacgtgattcactacgatgat
gacgctatctcgaagctgttggaccgtagccaggacgccactgaagacactgagatccag
aacatgaacgagtacctgagctccttcaaggtggctcagtatgtggtgaaggaagaggat
ggagaggaggaggtggagcgggagatcatcaagcaggaggagaacgtggatccagactac
tgggagaagctgctccgccatcactacgagcagcagcaggaggatctggcacgcaacctc
ggcaaaggcaaacgcatccgaaagcaggtcaactacaacgacacgacccaggaggaccaa
gagtggcaggatgatctttcagacaatcactcggagtactctgtggggtccgaggacgag
gacgaagatttcgaggagaggcctgaaggtggacgcagacagtctcgtcggcagctgaag
aatgagaaagacaaacctctgccacccttactggcacgagttgggggcagtattgaggtc
cttgggttcaacgctcgccagaggaaagccttcctcaacgccatcatgcgctggggcatg
cctcctcaggatgcttttaactcccattggctggttcgggacctgagagggaagagtgag
cgcgagttcagggcctatgtgtctctgttcatgagacacctgtgtgagccgggggcagac
ggagcagagacctttgctgatggagtcccacgtgagggactgtctcgtcagcatgttctt
accaggatcggcgtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcacgtaaat
ggaaagctgagttctccagatctgattcccatcggcatggagctcaagaaactgactgag
agtttatcttctgatcccaacacccctgtgccagccagccccatcgccacgcagcccggc
actcctgtcccgccagagaagacggagtctctcttgggtcccgctgaagacaaggagacc
acagagcaggacagcaagaaaccatcagagcaggaatcctccagtgcagagccagcatct
gcacctgagaaggcagctgatggagaagagagcaaggccagctcagaggagaagacagga
gatgagagggacacaaccgagtcaccctctgcaaagacggagccatctgccaactcgaaa
gagcttgctttgaaacagacagagctatcatccagtcagacctcacctaaaacggagccc
tgcaaagaaacagaaaaaggagatagtgattctcctcaggcgaaaactgaagacaaggaa
aataagccagctgttgcagatgatatgaagagtgaagatgcattagagggccgattaaac
ggagacaaagacactttggacgagatggatgagagcaggaaggaggacaagaatggatat
aaagccaagtttatgtttaatattgctgacggaggtttcacagagttgcacaccctctgg
caaaccgaagagcgagcggcgctgtcttctggaaagatgcacgacatctggcaccgtcgc
catgactactggcttttagctggcatcgtaacacacggatatgctcgttggcaagacatt
cagaatgacccacgttatgctattttgaatgagcccttcaagaccgagatgcataagggc
aactacctagagatgaagaacaagttcctggctcgccgctttaagttgttggagcaggct
ctggtgattgaggagcagttgaggcgggcagcttacctgaatatgacccaggaccccagt
cacccggccatggctctcaacactcgcttcgccgaggtggaatgtctggcagagtcccac
cagcacctgtccaaagagtctctggccgggaacaagcctgccaacgccgtgctgcacaaa
gtcttgaaccagctggaggagctcctgagtgacatgaaagctgatgtgacccgactgccc
aacatgctgtccaggatcccgccggtgtcggcccgtctgcagatgtctgagaggagcatc
ctgagccgcctcaccagccgagggagcgagcctccaccgcagcagcctttcagtcagggc
gggttcggctgctctcagatgtacagcagcagcttcggtggaggattcagaggaccgggt
ggacagccgatggtcaactacagtcagatgcctctggggccctacgtcagcgtgtcgtct
aacggccctccacccccaacaagccatctggacaagaagtcactcgactccttgagagac
gtggctacgcccgacctcaagtcgggcaaacctagtgatgtcatctgcattgaggactag
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integrated database retrieval system
