Plectropomus leopardus (leopard coralgrouper): 121959940
Help
Entry
121959940 CDS
T07454
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121959940 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121959940 (nup54)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121959940 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
121959940
NCBI-ProteinID:
XP_042365427
LinkDB
All DBs
Position
20:9397874..9407905
Genome browser
AA seq
571 aa
AA seq
DB search
MAFSFGGATSNPAASTSGFSFGSFGAKTTASTAAFGFGPTATTTTTASSGFGTLTAPGFG
AATTTAAAPATGFSFGSTNTGAFGGFGTTTTTAAAPGSTFSFAAPSNTTGGLFGNTQNKG
FGFSSGLGAGTTAGTTGFGTGLGTTSLGGFGGFNIQQTQQQPGGLFGQQAQQQGQAQHTQ
LYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNSQPVDFTQENPFCRFKAV
GYSCVPVSKDEDGLVVLLLNKKEADVRGQQQHLVESLHKILGSNQTLTVNVDGVKALPND
QTEVIIYVVERSPNGTSKRIPSTTLFSYLEQANVKVQLTQIGVAMSVTRTELSPAQLKQL
LQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIISS
DISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDT
IQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQHLKQQQDGLSH
LISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgccacgagtaacccagcagcaagcacgtccgggttttct
ttcggttcatttggtgccaaaaccacagcatcaactgcagcatttggctttggccccaca
gctactaccaccaccaccgcctcatcaggattcggcactcttactgctcctggttttggg
gctgccacaaccactgctgctgcaccagccacaggatttagttttggctccaccaacact
ggcgcttttggtggctttgggacaactacaacaactgctgctgcaccaggttccaccttt
agctttgctgctcccagcaacaccacaggaggcctgtttggtaacacacagaacaaaggg
tttgggttctcctctgggcttggcgctggaaccactgctgggacaacaggatttggaact
ggcttaggaacaactagccttggtgggtttggaggctttaatatccagcagactcagcag
cagccaggaggtttgttcggccagcaggcgcagcagcagggtcaggctcagcacacccag
ctttaccagcaggtcactgctctgtcagctcccaccttgttaggagatgagcgtgactcc
atcttagccaaatggaaccagttgcaggcatactggggcactgggaagggctactacagc
aacaacagccagcctgttgacttcacccaggagaacccattttgcaggttcaaggcggtg
ggctatagctgcgtcccagtgagtaaagacgaggatggtttagtggtcttgcttctcaat
aaaaaggaggcagatgtgcgaggtcagcagcagcacctggtggagtccctccacaagatc
ctgggaagcaaccagacactcactgtcaatgtagatggcgtcaaagccctgcccaacgac
cagacagaggtgatcatttacgtggtggagcgttctccgaatggcacctccaagcggatc
ccctccactactctcttcagctatctggagcaggccaacgtcaaggtgcagctcacacag
attggagtggccatgtctgtcacacgcacagagctgtctccagcacagctcaaacagctg
ctgcaaaacgcacctgcaggagtggaccctatcatttgggagcaggctaaggtggacaac
cctgacccagagaaattaataccagtgcccatggtaggtttcaaggagctgcttcgaagg
ctgcagatccaggagcagatgaccaaacagcaccagaccagagtggatattatctccagt
gacatcagtgaactgcagaagaaccaggcgaccacagtggccaagattgcgcagtacaag
aggaagttgatggatctctctcacagggtgctgcaggtgttgatcaaacaggagattcaa
aggaaaagtggttatgctatccaagtggatgaggagcacctccgtgtgcagctggacacc
atacagtctgaactcaatgcccccacacagttcaagggtcggttgaatgaattaatgtct
caaatccggatgcagaatcacttcggagctgtgaggtcagaagagcgttacagtgttgat
gcagaccttctcagggaaatcaaacaacacttgaaacagcagcaggatggtttaagtcac
ttgatcagcgtcatcaaagatgacttggaggacatcaaactcatagagcacgggctgagt
gacagtggacacatgagaggaggcatcctgagctga
DBGET
integrated database retrieval system
