Plectropomus leopardus (leopard coralgrouper): 121959987
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Entry
121959987 CDS
T07454
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121959987 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plep04990
]
121959987 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
plep04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121959987 (pdlim5b)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Thyroglob_assoc
PDZ_2
PilX
Motif
Other DBs
NCBI-GeneID:
121959987
NCBI-ProteinID:
XP_042365498
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Position
20:complement(14260275..14306266)
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AA seq
609 aa
AA seq
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MTSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDIILSINGLSTD
GMNHLEAQNKIKGCTDNLSLTLQRPSAPKDGVPKDEPQEIIKPVPITHPAPSTSYTKPSS
QPNPAYNKTARPFGGDSSAITASSPAAPSIPSLSSAFKPAAPSQPPQPPFLLKSSLPASD
SAPANSVPRASPGRSAFTSPSASSSSSNSSSPARVTATSSHPNVPQPSVYNTPINLYSNS
NACEVVMGQQRGLLESQGLSEHLNGKPNVEPDDRASPLSDASKKRLIEDTEDWHPRTGNC
QSRSFRILAQLTGTEKEQAPENSGKNDAADKTTPVVHTSPAAKTFSKSAASPRNGNVAPA
SAFKSPATQNKPSFKPGGLPGFPKGGAAPSFGKVTNPAPKGPDRPTPQPHPQDLNSLVQR
AEHIPAGTRTPMCNKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLVDGGFVEEKGQVYC
ERCYEEFLAPTCSRCNHKILGEIMNALKQTWHVSCFVCVACQQPIRGNTFHMEDGQPYCE
KDYYNLFGACCHGCDFPIEAGDKFLDALGFTWHDTCFVCAVCSTNLEGQAFFSKKDKPLC
KKHAHTVNI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagctacagcgtctccctggctggccccgccccctggggcttcagactgcaa
ggaggaaaggacttctgtctccccctcaccatctcacggctcactgatggaggtaaggca
gccaaagccaagatgagtgttggagacatcattctgtccattaacggcctttccacggac
ggcatgaatcacctggaggcccagaacaagataaagggctgcacagacaatctcagcctc
actctacagagacccagtgcacctaaagatggagtacctaaggatgaacctcaagaaatc
attaagcctgtcccaatcactcaccctgctccaagcacctcatacaccaagccatcaagc
cagcccaaccctgcatacaacaagacagcccgtccttttgggggggacagcagtgcgatc
acagcttcctccccggctgccccctccattccctcactgtcatccgctttcaagccagct
gccccctctcaaccgccacagcctccgtttctactcaagtcgagcctccctgcctcggac
tcagctccagccaactcagttcccagggccagccctggtcgctctgccttcacctccccg
tctgcctcttcctcctcatctaactcctcctctccagccagagtgacagccacctcctcc
caccctaatgtcccacagccctctgtctataacacaccgatcaacctctactccaattcc
aatgcttgtgaggtggtcatgggacagcagcgaggtcttttggagagccaggggctgtcg
gagcacctcaatgggaaacctaatgtggagccagacgaccgtgcttcccctctgagcgat
gccagcaagaagcgtctgattgaggacacagaggactggcacccacggaccggcaactgc
cagtcccgctccttccgtatcctggcccagctcaccggcactgaaaaggagcaagctccc
gagaacagtggaaagaatgatgcagctgacaaaaccacccctgttgtacacacatcgcct
gcagcaaaaacattttccaaatctgcagcatcacccaggaatggaaatgtggcccctgct
tctgcgttcaagagcccagccacccagaacaagccttccttcaagcctggaggtctacca
ggttttcctaagggtggagcagctccttcatttggcaaagttaccaaccctgctcctaaa
ggtccagaccgccccaccccacagccacatccacaggacctcaactctctggtgcagaga
gcggagcacatcccagccgggacacgcaccccaatgtgcaacaagtgcaacaaagtcatc
agggggccattcctcgtggccatgggcatgtcatggcaccctgaggaattcaattgtgct
cactgccactcctccctggtagacggtggctttgtggaggagaagggccaggtgtactgc
gaacgttgctacgaggagttcttagctccaacctgcagccgctgcaaccataagattctg
ggggaaatcatgaatgccctgaaacagacctggcatgtgtcctgcttcgtctgtgtcgcc
tgccaacagccaatcagaggcaacacatttcacatggaggatggacagccatactgtgaa
aaagactactacaacctgtttggggcctgctgccatggctgtgacttccccatcgaggcg
ggcgacaagttcctggatgctttaggattcacctggcatgacacctgctttgtgtgcgcg
gtctgctctactaatctggaaggtcaggcgttcttctctaaaaaagacaagcctttgtgc
aagaaacatgcccacactgtcaacatctga
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