Plectropomus leopardus (leopard coralgrouper): 121960168
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Entry
121960168 CDS
T07454
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03082
ATP-dependent chromatin remodeling
plep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121960168
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121960168
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plep01009
]
121960168
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plep03021
]
121960168
03036 Chromosome and associated proteins [BR:
plep03036
]
121960168
Protein phosphatases and associated proteins [BR:
plep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121960168
Transcription machinery [BR:
plep03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121960168
SWI/SNF complex
121960168
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121960168
PBAF complex
121960168
SWI/SNF complex
121960168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
121960168
NCBI-ProteinID:
XP_042365711
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All DBs
Position
20:764304..774887
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctctaagtaaaacgtttggccagaaaccagtgaaatttcagctagaacag
gatggagacttttacatggttggctcagaggttggaaactatctgcgcatgttcagaggc
tctctgtataaaagatatccatcgttatggaggaggctggcctcggtggaggagaggaag
aaaatcgtagcatcatcacatgccaccagtgttactctgctgaaggcgtcagaatgtgaa
gagatctttgaggggaatgatgagaaatacaaagcggtgtccatcagcacagagccccca
gcgtacctcagggagcagaaagctaagaggagcagtcagtgggtccccacactgcccaac
agctctcaccacctcgatgctgtgccttgctccaccaccatcaaccgcaacagaatgggc
cgggacaagaagaggaccttccccctgtgttttgatgaccacgaccccgcagtgatccat
gagaacgcagctcaggtggaggcgctggttcccattcgtctggacatggagatagacgga
cagaaactgcgagatgccttcacgtggaacatgaatgagaaactgatgaccccagagatg
tttgcagagattttatgtgatgacctggacctcaatcctctggcctttgtccccgccatc
gcctcagccattcggcagcagattgagtcctaccccactgacagtatactggaggagcag
gcagaccagagagtcatcatcaagctgaacatccacgtggggaacatttctctggtggac
cagtttgagtgggacatgtcagagagagagaactcgccggagtcgtttgcactgaagctg
tgctctgagctgggtctgggtggagagttcgtcaccaccatcgcctacagcatccgcggt
cagctcagctggcaccagaggacctacgccttcagtgagaatccgctcccaacagtagag
attgccatccgcaacacaggtgatgcagaccagtggtgccccctgctggagaccctcaca
gatgctgaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgagacga
ctggccaacacggctccttcctggtag
DBGET
integrated database retrieval system
