Plectropomus leopardus (leopard coralgrouper): 121960477
Help
Entry
121960477 CDS
T07454
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03271
Virion - Rotavirus
plep04145
Phagosome
plep04510
Focal adhesion
plep04512
ECM-receptor interaction
plep04514
Cell adhesion molecules
plep04530
Tight junction
plep04810
Regulation of actin cytoskeleton
plep04820
Cytoskeleton in muscle cells
plep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
121960477
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121960477
04514 Cell adhesion molecules
121960477
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121960477
09144 Cellular community - eukaryotes
04510 Focal adhesion
121960477
04530 Tight junction
121960477
09142 Cell motility
04820 Cytoskeleton in muscle cells
121960477
04810 Regulation of actin cytoskeleton
121960477
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121960477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plep04131
]
121960477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plep04147
]
121960477
04515 Cell adhesion molecules [BR:
plep04515
]
121960477
04090 CD molecules [BR:
plep04090
]
121960477
Membrane trafficking [BR:
plep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121960477
Exosome [BR:
plep04147
]
Exosomal proteins
Proteins found in most exosomes
121960477
Cell adhesion molecules [BR:
plep04515
]
Integrins
Integrin beta subunits
121960477
CD molecules [BR:
plep04090
]
Proteins
121960477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121960477
NCBI-ProteinID:
XP_042366126
LinkDB
All DBs
Position
21:20105101..20138478
Genome browser
AA seq
803 aa
AA seq
DB search
MDLKLLMISMLLGIFCCCNAQKEGNECINANAKYCGECIQAGAKCGWCKDPDFLKQGETV
STRCDEVQSLIKRGCEEKMIENPSGEGKILLNKMVTNRKKGAEKLKPEEITQIQPQKLRL
TLRSGEPQSFDLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSDGKKFNTLVGQQHI
SGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNVYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIAYTSRCKNGVVSEGESGRKCSNISIG
DEVMFTISVTSKGCPKQGKPETIKIKPLGFTEEVEITLNFICECECNKDGIKNSELCHFG
NGTYECGACKCNEGRVGRQCECSSNDVATEDMDRTCRKDNGTDICSNNGDCVCGTCECKK
RDNPEERYSGQYCECDNFNCDRSGNKLCGGHGRCECRVCVCDPNWTGSACDCSLDNSTCM
ASNKQICNGRGTCECGTCKCTDPKFQGPTCETCPTCPGVCTEHKECVQCRAFGTGEKKDI
CEKNCTYFNLIKVKDRDKLPQPNDASYPVMHCKERDANDCWFYYTYAVNNNTEKEVHVVD
TLDCPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQE
NPIYKSPVNQFQNPNYGRRAAVL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagttgctcatgatatccatgttgttaggcatcttttgttgctgtaatgct
cagaaagaggggaacgagtgcatcaatgccaatgccaaatactgtggggagtgcatccag
gctggagccaaatgcggctggtgtaaagacccggacttcctgaaacagggtgagaccgtg
tcgactcgttgtgatgaggtgcagtctctgataaaaaggggctgtgaagagaaaatgatc
gaaaacccaagcggggaagggaaaatcctcttgaacaaaatggtcacaaatcgcaaaaag
ggagcagagaaactgaagccagaggagattactcagatccagccgcagaaactcaggctc
acactccgatctggggagccccagtcctttgacttgaagttcaaacgagcagaagattat
cccatcgacctgtactacttgatggacctgtcttactccatgaaggacgatctggagaac
gtcaagaacctgggaacaagtctgatgctggagatgtcaaagatcacctcagacttcagg
ataggttttggctcctttgtggaaaagacagtcatgccgtacatcagcaccaccccggcc
aagctgctgaacccatgcacgggtgaccaaaactgcaccagcccattcagctacaagaac
gtcctcaaactgaccagcgatggcaagaagtttaacaccctggtgggccagcagcacatt
tctggaaacctggattctcctgagggggggtttgatgccatcatgcaagtggctgtgtgt
ggggatcatatcggttggaggaatgtgacccgtctgctagtgttctccactgatgctgga
tttcactttgctggcgatggcaaactgggtggcatcgttctgcccaatgacggaaaatgt
cacttggagaacaatgtgtacaccatgagccactactatgactatccctccattgctcac
ctggttcagaagctgagcgacaacaacattcagaccatctttgccgtcacagaggaattc
cagcctgtttaccaagagctgaaaaatctgataccaaagtctgcagttggcactctgtca
gccaactcaagcaatgtaatcaacctgattatagacgcttacaactctctgtcatccgaa
gttattctggagaacagcaagcttccagaaggagtgaccattgcctacacatcccgttgt
aagaatggagtggtcagtgagggagagagtggacggaagtgctccaacatctccatcgga
gacgaggtcatgtttaccatcagtgtgacatcaaagggctgtccgaaacaaggcaagcca
gagaccatcaagataaagcccctgggatttacagaagaggtggagattaccctcaacttc
atctgtgagtgcgagtgcaacaaggatggtatcaagaacagcgaactttgtcactttggt
aacgggacctatgagtgtggagcctgcaagtgtaatgaagggcgcgtgggcagacagtgt
gaatgcagcagcaacgacgtggccactgaagacatggatcgaacctgccgtaaagacaac
ggcaccgacatctgcagcaacaacggagactgtgtgtgcggcacgtgtgagtgcaagaag
agggacaaccctgaggagcggtacagcggccagtactgcgagtgtgacaacttcaactgt
gaccgctccggaaacaaactgtgtggtgggcatggacgctgtgagtgcagagtgtgtgtc
tgtgaccccaattggaccggaagtgcctgtgattgttctttggacaacagcacatgtatg
gccagtaacaagcagatctgtaacggcagaggaacgtgtgaatgtggcacctgcaagtgc
actgaccccaaattccagggacccacctgtgagacttgtcctacctgtccaggagtctgt
actgagcacaaagagtgtgtccagtgccgggcgtttggcaccggtgagaagaaggacata
tgtgagaaaaactgcacctacttcaacctgattaaagtgaaggacagggacaagctgccc
caacccaatgacgcctcttaccccgtgatgcactgcaaggagagggacgccaacgactgc
tggttttactacacctacgctgtcaacaacaacacggagaaggaggtgcatgtggtggac
acgctggactgccctgctggccccgacatcatccccatcgtcgcgggtgtggttgccggc
atcgtcctgattggcttagccctgctgctcatctggaagctgctgatgatcatccacgac
aggagagagttcgccaagtttgagaaggagaagatgaacgccaagtgggatacgcaagaa
aaccccatatacaagagtcctgtcaatcagttccagaacccaaactatggtcgcagagct
gctgtcctttaa
DBGET
integrated database retrieval system
