Plectropomus leopardus (leopard coralgrouper): 121960498
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Entry
121960498 CDS
T07454
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121960498 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121960498 (nup58)
Messenger RNA biogenesis [BR:
plep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121960498 (nup58)
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Siah-Interact_N
Nup49_C
PSY3
Phage_int_SAM_2
Motif
Other DBs
NCBI-GeneID:
121960498
NCBI-ProteinID:
XP_042366154
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Position
21:15226491..15241076
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AA seq
601 aa
AA seq
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MSGFNFGSGTLGSTSTGGGFTFGGAASVPAANTGGFSIGTALGTATATPAAAATTSITPS
LGLGGSLFGQKPSGGFSVNTPASSAAAPTTGLTLGAPASTAASTGFSLAFNKPTASATPF
SLTTTSTPSSASAGAGLSFGSVLTSTAPQQPAAAGFTLGLGGTTTTTAAASTGPTLGGSL
FSNTLSTGLGQSTLGGGGGLTLGSLLATSTAASAAPAPNVGLGGVDFSTSSENKSDTSSG
ANAQDSKALKDENLPPVICQDVENFQKFVKDQKQVQEDISRMSSKAISKVQDDIKSLKQL
LSVSASGLQRQALAIDKLKLETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQF
EVQLQQYRQQIEELENHLTTQSSGSHITPQDLTMAMQKLYQTFVAQAAQLQSVHENVKIL
KHQYLSYRRAFLEDSTDVFESKRTSNRKWQSTPRVTTGPAPFSSVPNAAAVAMAATLTQQ
QQPTPGTQAPLGAGFGNPFASAVGTSLGSSTLGGFGGGPGFGGVGTGGSSFAFSSTSKPT
GGSLSAGFGSSSSSGFNFSNPGINPSAGLTFGVSNPAAAGFGAAPLLQLKKPPAGNKRGK
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctttaactttggatcagggactcttggttccaccagcaccggtgggggtttc
acatttggtggcgcagccagtgtgcctgcagccaacactggtggcttttctattggaact
gctctgggtacagcaaccgccacccctgccgcagctgccaccaccagcatcaccccatct
cttggtctcgggggcagcctctttggtcagaagcccagtggaggattctctgtcaacaca
cctgcctcaagcgctgccgcacccactacaggccttacattaggtgccccagcttctaca
gctgcatctactggcttcagcttggccttcaacaagcccaccgcctcagcaacacccttc
tccctcaccaccacttccaccccttcatcagcctctgcaggggcaggtttatcatttggc
tctgtcctgacatccacggctccacagcagcctgcagccgcaggcttcacccttggtctt
ggtggcacaaccaccaccacagcagcagcctcaacaggcccaacactcggcgggagtctc
ttttccaacactttgtccacaggtttgggtcagagcactcttggaggaggaggcgggtta
acgttgggttcccttttagctacctccacagcagcatcagcggcacctgcccccaatgtt
ggcctgggtggagtcgacttcagcacttcctctgagaataagagcgacacatcatctgga
gccaatgcacaggacagtaaagctttgaaagatgagaacctgccaccagttatttgtcaa
gatgtcgaaaatttccaaaaatttgtgaaagaccagaaacaggttcaggaggacatcagc
aggatgtcatcaaaggccatttctaaagtccaagatgacattaagagcctcaaacagctt
ctctctgtcagtgccagtggtctgcagcgccaggctttggccatcgacaagttaaagctg
gagacagcgcaggagcttaaaaatgctgacattgcactgcgtactcagaagactccccct
ggacttcagcatgagaacacagctccatcagattatttccgcagcctggtagagcagttt
gaggtgcagttgcaacagtaccggcagcagatagaagaacttgagaaccacctgacaacg
cagagcagtggctcccacatcactcctcaggacctgaccatggcaatgcagaaattgtac
cagacatttgttgcacaggcggcccagctccagtctgtccatgagaatgtcaagatcttg
aagcaccagtacctctcttaccggcgggccttcctggaagactcaacggatgtctttgag
tccaagcgcacgtctaacaggaagtggcagagtacaccgcgagttacaactggacccgcc
ccgttctccagtgtgcccaatgctgcagcggttgccatggcagccacgttgacccagcaa
cagcagccaactccagggacccaggcacccttgggggcagggtttggaaacccctttgct
tcggcagtgggcactagcttgggctcgtctacccttggaggttttggtggtgggccagga
tttggtggggtggggactgggggttcttcttttgccttctcctccaccagtaagcccaca
ggaggcagtctgagtgcaggttttggtagcagcagcagctcaggcttcaacttcagtaac
cctggaatcaacccctcggccggcctgacatttggcgtttctaacccagcagctgcaggc
ttcggcgcagctccccttctccagctcaagaaaccccctgctggtaataaaaggggcaag
agatag
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