Plectropomus leopardus (leopard coralgrouper): 121960639
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Entry
121960639 CDS
T07454
Symbol
rttn
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plep03037
]
121960639 (rttn)
Cilium and associated proteins [BR:
plep03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121960639 (rttn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
121960639
NCBI-ProteinID:
XP_042366374
LinkDB
All DBs
Position
21:13190022..13231822
Genome browser
AA seq
2244 aa
AA seq
DB search
MELSQLIKKIGHSLAEIRVRALKNIMCKLDHSLISVSDIVQEKMLFVYLLEWFNFPEVPM
QEEVLELLLTLSKHPSAAQMLRDVGAVDFLTQLSPNVEPRLRAVIDGTLDQLFQLPELLP
SHVMVYAHGQHATAPTALTVVPPEEHAPKMGFFHKSMPSHTDVPPQKIAVHESVRCLKFS
VFPWLILTNTDRHILSSNESSLRSINPNLVRTACELLCDVIMQDFPAEIFLQRPSIIKNL
LSLLRLGSGKCEASYLHLQALSCLRQLCVGLRRRLRFHQDPSFYSTKQDPVSQNSSFSHS
QEVRGTQRSQASSPGAECSPRPSVVGRTGQRARGDGQDGDAASSSGSSQRGGAAVQAPRQ
TAQSPADVAHLELPDLGVEDVLELQLQQLTLAQFIVATMEHAIPLLKTEGSHVFHRVLEL
LCDAVLLLGDSVCELVWDDRSLVGMELKGKLQGCMELLGDILSYHQSFSADVPHNCQVHH
RMAYTGTAIFTIKLLRTILPPEKASDNLPENTATAIFHLCLDTSLGSLLPSMQETAVAYL
EQVNSDSHDLYRRVTRAALWMESTCNFLKEAQAEGEKNWLELLELADQAIDGLPFHHHLP
IIKECVHICSYLWKFDQPSPLLQTESQKLLLKLLSHPLLPVRTETYESTLNLVKDCLGIQ
NVSRQEGAACGGVNFLIHHRVLYEISAFGLQDSAEKVNVAAKDILLFLLKGRLMMTASTW
DRFNEALYPVMPILQGYACTEDSLGNCVLLISDVSDVARDDASPITTKLKAALRLLFTKQ
PTVRVAAVQQILPHLTSHDDANTARPELDQPVISSLPNLFCLRHPLDITLDTSSKSVLKA
ESVEKLFCILNSDTVDISLRRSAAEQLSVVLQDTTMHPVLKNLGITDKVISFIMGSVNGN
KSFDCLLEPCVCILRKLVYADPSLRHSLAHRNLLLLTLLRASLIVKENRGNGSEIAVLMS
LLLFDETASIEIWSDKSNLDVALTPFSLPLTVIRRFNIPFQAAMHHAVSPYCCVLPPSSD
LLTLAPARQALQVAWNTAWHSGIDSLLEELLDQAPKDPEFHPDLKLSDAQVLSLQAVHLP
TALQDCIKAIVTAAGHSSVTSALSRLSLYLLIDRLALPHSPTHSCRDTLQSLSWQAAVTR
FLQVRPACVEDERLLVGIVAFLNAYFKQMHTESESDPEDKDLRWILKLLLNQETASLLNL
LLGVETQTSAQSPGELEELKNHVSQRLQRELTSFFNILLLRLAHTTDRLCLALAGPFKSQ
LAVRLLQSLRVSDAPRFYGLPSLERTLQGMVSLTAQPGWSSHCSDLEPISLCSKYLSGLL
EVISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMMVENEDKDFISQWSLGNEAAAEE
ASASQLGLAWLIPLWVDRDQEVRFASLGLGAALSSVPSGCQALCASCQNISGGLWGTLLN
ILLDQQESSMVRREAAFILHNLLVMPMPANAEEAKDSHWQHPCVHDEVSGVSLVGLPALQ
ALLYHCQYFQHVAISASKCYQGRYTFHLQPPAGAYSGPSPQESNSLDSVNSLWFWRCDPP
APTVDSSRPSSSLSTSSTVVRGSGPHTPKGTSPLNMTEDTPASRLMAQGQSDTDTSDSAT
SQDSRQGEPLATEPVVMVTPDLMTAHCGLLTNLLAILPDFTLTAIRHNQLLQALASLVDI
GPIEKCLTELKTPSILPGEREDIKIQFVTLLQFLSSFCKLLQSCVTVSWELIGQMDFLKQ
LLTTLVAVLMLDTKGLDAGTRDAVCVCWADVFMLLATLVRRDSSAAYPSVSAALGRRWRT
FAGTLSVCVNATFADPHLHTVALQFLCTVFTEETKVAEVTTSNPKHVTALTDIVNGPSAS
QLCELLLQSFDKRTVQDPLKKLTARALMTLLACSPMAQNHAAKAGLIDSCAEQMKQTYSQ
LHLESVRPGKASHRKKEEGYLKEVKLTVDILRSALYRNDECKVVATDARLTLAVYALWPW
LLLDDPTMEAVLELLCVYTANCTPACSCVCGGGPGVAPGSKGTPSNSLMHCVMKLASGVA
PDNSPVQKLAFCLLANLAMSRDCRGLLQKNNFLQAFLSVPVPKAGGVKATSVGCGGGSLL
GLWLRLLVSLSSAEDGQQSILRVTGALELLADLAPQRRHALLTLHNLCFCPANKPHVIAS
DKAMKVLLCCLNSKVMETRSMGASALWALLHNNQRAKTTLKCPSVRLRIEEARTISKKDA
ENKQDPTSAYLLKCLENLSQLLNN
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atggagttatctcaacttataaagaaaataggccactctttggcggagataagagtccga
gcattaaagaacatcatgtgtaagctggaccattccctgatttccgtctctgatatcgtc
caagaaaagatgctgtttgtgtatctccttgaatggttcaatttccccgaggtgccgatg
caggaggaagttcttgagttgctcctaactttatcaaagcatccaagtgcagcccagatg
ctgagagacgttggggcggtggacttcctcactcaactgtctcctaatgtggaacccaga
ctgcgagctgtcatcgatggaaccctggaccagctgttccagctaccggagctactcccc
agtcatgtaatggtctacgcccatggacagcatgctacagctccaacagcactgacagtt
gttccacctgaggagcatgctcctaaaatgggctttttccacaagagcatgccgagccat
acagatgtaccacctcagaagatagcagtacacgagtctgtgaggtgtctcaagttttct
gtgtttccatggcttattttgacaaacacggacaggcacatactttcatccaatgagagt
tctctaaggagcattaaccccaacttggtgcggaccgcatgtgaacttctgtgtgatgtc
ataatgcaagactttccagctgagatcttcctgcaaaggcccagcattataaagaacctc
ttgtccctcttgaggctgggttcaggcaaatgtgaggcaagctacctccacttgcaggct
ctttcctgtctgcggcagctttgtgtggggctaaggaggagactacgctttcatcaagat
ccaagcttctactctacaaagcaagatccagtttcccagaactcgtccttttcccactcc
caggaggtgcgaggcacccagcgctcccaggcctcatctccaggagcagagtgctctcct
cgtccctctgtggtggggcgcacaggccagagagccaggggagatggccaagatggagat
gcagcttccagcagtggcagctcgcagagaggtggagcagcagtccaggcccccaggcag
acggcccagtcacctgcagacgtggcccacttggagcttcccgacttgggggtggaagat
gtccttgagctgcagttacagcagctcactttggctcagtttatagttgccaccatggaa
catgccatacctctgcttaaaacagagggttcgcatgtgttccatcgtgttctggagctg
ctgtgtgacgccgtcctcctgctcggggacagtgtttgtgagctggtctgggacgatcgc
agcctggtggggatggagctgaagggaaagctgcaaggctgcatggaactgttgggggac
atcctgagctaccatcagagcttttcagcagacgttccccacaactgtcaggttcatcac
agaatggcctacactggcactgctatatttaccattaaactcctacggaccatcctccct
cctgagaaggctagtgacaatctcccagaaaacacggcaacagctatttttcacctgtgc
ttggacacatcattgggaagtttattacccagcatgcaagagacagcagtggcctacttg
gagcaggtgaactcagacagccatgacctctacaggagggtgacccgcgccgccctctgg
atggaatctacttgcaacttcctcaaggaagcacaagctgagggggaaaagaactggttg
gagttactggagctggcagaccaagccatagacggcctcccatttcaccatcacttaccc
atcatcaaggaatgtgttcacatctgctcttacctgtggaagttcgaccagcccagcccc
ctcctccaaacagagagccagaaacttctcctcaagctgctgtcccatcccttactgcct
gtcaggacggaaacatacgaaagcactttaaacctggtcaaggactgccttggcatccag
aatgtgtcacgacaggaaggagcagcctgcggtggagtcaacttccttatccaccacagg
gtgctctatgaaataagtgcttttggactccaggattctgcagagaaggtgaacgtcgct
gccaaggatatcctgctattcctgctcaaaggacgattgatgatgacagcgtccacctgg
gacagattcaatgaggcactttacccggtcatgcccatactacagggttatgcctgcact
gaagattcacttggaaactgtgtcctgctgataagtgatgtgtcggacgtggcaagagac
gatgcgtctccaatcacaaccaagctaaaagcagcgctccgactccttttcaccaaacaa
cccactgtgagagtagcagcagtgcaacaaatcctgccccacttaaccagccatgatgat
gcgaacacagccagaccagagctggatcaaccagtgatctcttcgcttccaaatctcttc
tgcctcagacaccctttggacatcacactggacaccagcagcaagtctgtcttaaaggcg
gagtcggttgagaagctgttttgtatcctgaactcagacactgttgacatctccctgaga
agatcagctgcagagcagctgtctgtcgtgctacaagacacaacaatgcacccagtgctg
aagaatcttggaataacagacaaagtcatttctttcattatggggagtgtgaacggcaac
aagagcttcgattgcctgctggagccttgtgtatgtatcctgaggaagctggtgtatgct
gatccatctctgaggcacagtctggcacatcgcaacctcctgctcctcacactgctcagg
gcatccttgatagtgaaggagaacagaggcaatggaagtgagattgctgtcctgatgagt
ttactgctgtttgatgagactgccagcattgaaatatggtcagacaaatccaacctagat
gtggccctcacacctttctccctgccgctgacagtaatacgcaggtttaacatcccattt
caagcagcgatgcatcacgctgtcagcccatattgctgtgtcctgcccccttcctctgac
ctcctgaccctggctcccgcccgccaagccctgcaggtggcctggaatactgcatggcat
tctgggatagacagcctccttgaagagctgcttgatcaagcacccaaggatcctgaattt
catcctgacttaaagctgtcagacgcacaggttctgtctctgcaggcggtgcaccttccc
actgcgctgcaggactgcatcaaggccatcgtcacggcagcaggacacagctcagtgacc
tctgccctctcaaggctcagcctgtatttactgattgaccgactggccctccctcacagc
cccacccacagctgcagagacaccctgcagtccctcagttggcaggcagcagtcaccagg
tttctccaggtgcgtccagcttgtgttgaggatgagaggttgctggtgggcattgttgca
tttctgaatgcctacttcaaacagatgcacactgagtctgaatctgaccccgaagacaag
gacctgcgctggatactgaaactgcttctcaatcaggagaccgcatcccttcttaatctg
ctgcttggtgtggagacacaaacttcagctcagagcccaggggagctggaggaattgaag
aaccatgtcagccagcgactgcagagagaactcaccagcttctttaacatcttactcctc
cggcttgcacacaccactgacaggctctgtctggcattagcagggcccttcaagagccag
ctggcagtccgtttgcttcagagcctgcgggtgtctgatgccccacgtttctatggcctt
cccagcctggagaggacactgcagggcatggtcagcctgactgcacagcctggctggagc
tcccactgctccgacctggagcccatctcgctctgctccaagtatctcagtgggctatta
gaggtgatctcctcattttatgttgagtggggaggcaactccatgtcttttatggggaaa
ggtgtgaccaagaatgctgtcatctgcttgcttcatctgtcccatgagatgatggtcgaa
aacgaggacaaggactttatatcccagtggtctttggggaatgaggcagctgcagaggag
gcgagtgcctctcagcttggtttagcctggctcatcccgctgtgggtcgatcgtgatcaa
gaggtgaggtttgccagtttgggtttaggcgcggctctgtcctcggtgcccagcgggtgt
caggctctctgtgccagctgtcaaaacatcagcggaggtctgtggggcacgctgctcaac
atccttctggatcagcaggaaagcagcatggtccgcagagaggctgcatttatcctgcat
aacttgctggtgatgcccatgcctgccaacgcagaggaggccaaggactcccactggcag
catccatgtgtccatgacgaggtgtccggtgtgtctttggtgggtcttccggcgctccag
gctctgctttaccactgtcagtactttcaacacgtggctatctctgcctccaaatgttac
caaggcaggtacactttccatctgcaacctcctgctggtgcttacagcgggcccagtcct
caggaaagcaattcactggattctgtgaactctctgtggttttggagatgcgatccacca
gcacccactgtcgactccagcagaccttcaagctccctctctacgtccagcactgtggtt
cgtggctcagggcctcacacacccaagggaacctctcccttgaacatgacagaagatacc
cctgccagcagactgatggctcaaggccagagtgacacagacaccagcgactcagcgacc
tcccaagactcccgacagggcgagcccctggccacagaaccagttgtcatggtaactcct
gacctcatgacggcccactgtggcctgctgactaacctgctggccatcctgccagacttc
accctcactgccatccgacacaaccagctcctccaagcgctggccagtctggtggatatt
gggcccattgagaaatgtctgactgagctgaagacacccagcatcctaccaggagagaga
gaagatatcaagatccagtttgtcacactactgcaattcctgtccagcttttgcaaactg
ctgcagtcatgtgtcacggtgagctgggagctgattggccagatggacttcctgaaacag
ctgttgactactctggtggcagtgctcatgctggacaccaaaggattagatgcaggtacc
cgagatgcggtttgcgtgtgctgggcagacgtgtttatgctcctggctactctggtgagg
agggacagctcagcagcgtacccatctgtctctgctgcgctggggagacgctggcggaca
tttgcaggaacattatcggtgtgtgtgaatgcgacgtttgcagaccctcatctccacaca
gtggctctgcagtttctttgtacagttttcacagaggagacaaaggttgcggaggtcaca
acttcaaatcctaaacatgttactgctttaactgacatagtgaatggtccctcagccagc
cagctgtgtgaactgttactgcagagttttgataagaggaccgttcaggaccctttgaag
aagctgacagccagagctctgatgacactgctcgcctgtagtcccatggctcaaaatcac
gcagccaaagctggtctaattgacagctgtgcggaacaaatgaagcaaacttactcccag
ctccacctggagtctgtccgacctggcaaagcttcccaccgtaaaaaggaagaaggctat
ttaaaggaagtcaagctgactgtggatatcctgcggagtgctctttaccgcaacgatgaa
tgcaaagtggtggccacagatgctcgcctaacactggcagtctatgctctttggccctgg
ctcctattggacgaccccaccatggaggcggtgctggagcttctgtgtgtctatacagcc
aactgcaccccagcgtgcagttgtgtttgtggcggtggccccggggttgcaccaggatct
aaaggcaccccgagtaactctttaatgcactgtgtcatgaagctggcctcaggggtcgcc
ccagataacagccctgtccagaagctagccttctgtctcttggcgaacctcgccatgtcc
cgcgactgtagaggcctcctgcaaaagaataatttcctgcaagccttcctgtcagtgcca
gtacccaaggcgggtggtgtgaaagccacctctgtaggttgtggtggtgggagcctgctg
ggcctgtggctgaggctgctggtcagtctctcgtccgcggaagatggccaacagagtatc
cttagggtgactggagccctggagctgctggcggacctggcaccgcagcggcgtcacgca
cttctcacccttcacaatctctgcttctgccctgccaacaagccacacgtcatcgccagt
gacaaggccatgaaagtgttgctctgctgtctaaacagtaaagtgatggaaactcgctct
atgggagcttctgcactttgggcattgctccataacaatcagagggctaagaccactttg
aagtgtccctctgttcgattgagaattgaggaggcacgtaccatctctaagaaggatgca
gaaaacaagcaggatcccacaagtgcctacctgttgaagtgccttgaaaacctttcccag
ctgctaaataactga
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integrated database retrieval system
