Plectropomus leopardus (leopard coralgrouper): 121960679
Help
Entry
121960679 CDS
T07454
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plep
Plectropomus leopardus (leopard coralgrouper)
Pathway
plep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121960679 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plep03019
]
121960679 (drosha)
03009 Ribosome biogenesis [BR:
plep03009
]
121960679 (drosha)
03036 Chromosome and associated proteins [BR:
plep03036
]
121960679 (drosha)
Enzymes [BR:
plep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
121960679 (drosha)
Messenger RNA biogenesis [BR:
plep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
121960679 (drosha)
Ribosome biogenesis [BR:
plep03009
]
Eukaryotic type
90S particles
RNase
121960679 (drosha)
Prokaryotic type
rRNA processing factors
121960679 (drosha)
Chromosome and associated proteins [BR:
plep03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
121960679 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
121960679
NCBI-ProteinID:
XP_042366419
LinkDB
All DBs
Position
21:1714570..1854334
Genome browser
AA seq
1351 aa
AA seq
DB search
MSFHQDRGSPRGGMPPGQHGSPQNYRPTNLRPPPPQPPVPPYHYDPQTPPTSSYHGNYMP
PHSDFMQYPPPAPSQPPSSLNQCPVRPPFPKPPVRQGFPEPPPNFPPPPLPSSTGGPTSG
SQVSAQNPYHPYMMPPVPPPPLPHPPMPPPIASQSMSYHPPYSMNYPHPPHPPFPPPTFN
PGYTQSPSSFKPNHNFRHGGQYKYEKPMDSRRSPERGYRHDDHRQKGYGYSSHSDRHKME
FPGERKDRGRSPDRRGRPEGGRYRSDYDRGRTPPRHRSRDRSRERYRHRESRRSQSPDRH
RKRPRSRSTSRDRKRGRWEEERDRRSESSSGPSRERSYSSSVRSRDSEEAFADRERERER
ERERDREKEKEKEKGDDEKEEEELLKPAWIRCTHAENHYSNDPMDQVGDSTVVGTSKLRD
LYERFEEELGRRQERAKAARPKWDPPKTKLDEDPDDSSSDSDCESDGEESTCSSSSDSEV
FDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPVKEC
RPMNNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTNIPLCRVI
RFNIDYTIHFIEEMTPENYCVRGLELFASYLFQDILELYDWNLTGPEFEASGCQRFHFMP
RFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAEECKGMIVT
NPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHL
LANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMML
PVLTHHIRYHQCLMHLDKLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIR
QPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVH
LYYLFPNLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANC
FEALIGAVYLEGGLEEARQLFGRLLFNTGGLQEVWLNYPPHPLQVQEPQTDRQLIETSPV
LQKLTSFEDSIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLF
IHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLES
FIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPL
YKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRF
IERKYRQELKEMRRERERQEKETDEPEECRK
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggatcgggggagtccccgaggaggaatgccccccgggcagcacggc
tcccctcagaactaccgacccaccaacctgaggccgccacctccccagcctcctgttccc
ccgtaccactacgatcctcagactcctcccacttccagctaccatggaaactacatgcct
ccacactctgacttcatgcagtaccctccgccagcaccgtcccagcctcccagttctctt
aaccagtgcccagtgcgcccaccgttccccaagccccccgtccggcagggcttccctgaa
ccaccgcctaatttcccacctcctccccttcccagctccacaggtggtcccacatcaggg
tcccaggtgtctgctcagaatccttaccacccttacatgatgcctcctgtgcccccacct
ccattaccacacccacccatgccgccccccatagcttctcagtctatgagctaccaccct
ccgtactccatgaactacccccaccctcctcaccctcctttccctcctcctaccttcaac
ccaggctacactcagagccccagctctttcaaaccgaatcacaacttcaggcacggcggg
cagtacaagtacgagaagcccatggacagcaggaggtctccagagagaggctatcgccac
gatgaccaccggcagaagggctatggctacagcagccatagtgataggcataaaatggaa
tttcctggagagaggaaggaccgcgggaggagtccagacaggcgcggccggccagaggga
ggacggtacaggtcagactatgacagaggccggactcctcccagacacaggagcagggat
cgaagcagggagaggtatcgtcacagagagagtcggaggtcccagtcgcccgacaggcac
agaaagaggcctcggagtcggtccacaagcagagacaggaaacgcggtcgctgggaagag
gagagggacagaaggtcggagagctcctcgggcccgagcagagagcgcagctactcctcc
tccgtcaggagcagagactctgaggaggccttcgccgacagagagcgggagcgagagcgg
gaacgggagcgggacagagagaaggagaaggagaaagagaagggggacgatgagaaggag
gaagaagagctgctgaaacctgcgtggatccgctgcacacacgccgagaaccattactcc
aatgaccccatggaccaagtgggagactccaccgtggtggggaccagtaaactgcgggac
ctgtatgagcgctttgaggaggagctggggaggagacaggagagagcaaaggccgctcga
ccgaaatgggacccgcccaagaccaaactggacgaagatccagatgacagcagcagtgac
tcagactgtgagtcagatggggaagaaagcacctgctccagcagctctgactcagaggtt
tttgatgtcatcgccgagatcaagaggaagaaagcgcaccccgaccgcctgcacgaggag
ctgtggtacaacgaccccgggcagatgaatgatggtcccctgtgtaagtgcagtgccaag
gccagacgtacagggatccgccacagcatctacccgggggaggagcctgtcaaagagtgc
cgaccaatgaacaacaatgcaggaaaactgtttcactacaggatcactgtgtctccaccc
actaacttcctgactgacaggccgacggtgatcgagtatgatgaccatgagtacctgttt
gaaggcttctcacttttctcccacacacctctcactaacattccattgtgccgtgtgatc
cgcttcaacatagattacaccattcacttcatagaggagatgacaccggagaactactgc
gtccgaggcctggagctgttcgcctcctacttgttccaggacattcttgagctgtatgac
tggaacctgacaggtcctgagtttgaggcttctggatgccagcggttccatttcatgcct
cgttttgtccgattcttacctgatggtgggaaggaggtgctgtccatgcatcaggtgctg
ctctacctgctgcgcagcagcaagcccctggtccccgaggaggagattgcagacatgctg
cagtgggaggagctggagtggcagaaatacgcggaggagtgcaagggcatgatcgtcacc
aacccgggcatgaaacccagctcggtgcgtatcgaccaactggacagggagcagttcaac
ccagacgtcatcaccttccccatcatcgttcatttcgggatccggcctgctcagctcagc
tacgcgggagaccctcagtaccagaagctgtggaagagctatgtgaaactacgccacctg
ctggccaacagccccaaggtcaagcagattgacaagcagaagctgacacagagagaggaa
gctcttcagaagatccgtcagaagaacactatgcgccgtgaggtgacagtggagctcagc
agtcagggcttctggaagactggcatccgctccgacgtctgtcagcacgccatgatgctg
cctgtcctcacccaccacatccggtaccaccagtgtctgatgcacctggataagctcatc
ggctacgtcttcaaggagcgctgcctccttcagctggccatgactcaccccagtcatcac
ctcaatttcggtatgaatcccgatcatgcccgcaactccctctccaactgtggcatccgc
cagccgaagtacggagaccggaaagtccaccacatgtacatgaggaagaaaggaatcaac
acgttgattaacatcatgtctcgtctggggcaggatgacccctccccctccaggatcaat
cacaacgagagactggagttcctgggtgatgctgttgtcgagttcctcaccagtgtccac
ttgtactaccttttcccgaatttggaggagggcggcctggccacctacagaacagccatc
gtgcagaaccagcacttagccatgctagcaaagaaactggagttagatcgcttcatgctc
tacgctcacggaccagatctgtgccgggagtcggacctgcgacacgccatggccaactgc
ttcgaggctcttatcggtgctgtgtatttggaaggaggcttggaggaggcccggcagctc
tttggtagactgcttttcaacactgggggcctacaggaggtctggctcaactacccacca
catcccctgcaggtccaggaacctcagacggacaggcagctgatcgagacgtcccccgtc
ctccagaaattgaccagcttcgaggactctatcggagttttgttcacacatgtgcgtctc
ctggccagagccttcaccttgaggactgtggggttcaaccacctcaccctgggccacaac
cagaggatggagttcctgggagactcgatcatgcagctggtggccacagagtacctcttc
atccacttcccagaccaccatgaaggacatttaacactactccgcagttcgctggtaaac
aaccgaacgcaggccaaagtggcggaggagctggggatgcaggagttcgctatcaccaat
gacaaaaccaaacggccagtggcgctacgcaccaagactctggcggacttgttggagtca
ttcatcgcagctctctacattgataaagacctggagtatgtgcacaccttcatgaacgtc
tgctttttcccccgcctgaaggagttcatcctgaaccaggactggaatgacccaaagtct
cagctgcagcagtgctgtctgaccctgagaacagagggcaaggagcccgacatcccactg
tacaagaccctgcagacagtggggccctcgcacgcccgcacctacaccgtcgccgtgtat
ttcaaaggggagcgaatcggctgtggcaaaggcccaagcatccaacaggcggaaatggga
gctgcgatggatgcgctcgaaaaatataacttcccacagatggctcatcagaagcgcttc
atcgagcggaaatacagacaggagctgaaggagatgagacgagagcgcgagcggcaggag
aaggagaccgacgagccggaggaatgcaggaagtga
DBGET
integrated database retrieval system
